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RAB30 RAB30, member RAS oncogene family [ Gallus gallus (chicken) ]

Gene ID: 419020, updated on 17-Aug-2024

Summary

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Symbol
RAB30provided by CGNC
Full Name
RAB30, member RAS oncogene familyprovided by CGNC
Primary source
CGNC:12961
See related
Ensembl:ENSGALG00010007979
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See RAB30 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (188952208..188998940, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (188974436..189021619, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene prolylcarboxypeptidase Neighboring gene DNA damage induced apoptosis suppressor Neighboring gene uncharacterized LOC107052306 Neighboring gene PCF11 cleavage and polyadenylation factor subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    188952208..188998940 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_417213.8 → XP_417213.3  ras-related protein Rab-30

    See identical proteins and their annotated locations for XP_417213.3

    UniProtKB/TrEMBL
    F1NWF1
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  2. XM_040647075.2 → XP_040503009.1  ras-related protein Rab-30

    UniProtKB/TrEMBL
    F1NWF1
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  3. XM_046902513.1 → XP_046758469.1  ras-related protein Rab-30

    UniProtKB/TrEMBL
    F1NWF1

  4. XM_015280229.4 → XP_015135715.1  ras-related protein Rab-30

    UniProtKB/TrEMBL
    F1NWF1
    Related
    ENSGALP00010010555.1, ENSGALT00010019006.1
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  5. XM_046902515.1 → XP_046758471.1  ras-related protein Rab-30

    UniProtKB/TrEMBL
    F1NWF1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    188974436..189021619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040658637.2 → XP_040514571.1  ras-related protein Rab-30

    UniProtKB/TrEMBL
    F1NWF1
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  2. XM_040658639.2 → XP_040514573.1  ras-related protein Rab-30

    UniProtKB/TrEMBL
    F1NWF1
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  3. XM_046909326.1 → XP_046765282.1  ras-related protein Rab-30

    UniProtKB/TrEMBL
    F1NWF1

  4. XM_040658638.2 → XP_040514572.1  ras-related protein Rab-30

    UniProtKB/TrEMBL
    F1NWF1
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  5. XM_046909327.1 → XP_046765283.1  ras-related protein Rab-30

    UniProtKB/TrEMBL
    F1NWF1
Nucleotide Protein
Heading Accession and Version

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