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CG31301 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41865, updated on 2-Nov-2024

Summary

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Official Symbol
CG31301provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0051301
Locus tag
Dmel_CG31301
See related
AllianceGenome:FB:FBgn0051301
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG12258; Dmel\CG31301
Summary
Predicted to enable nucleic acid binding activity. Predicted to be active in nucleolus and nucleoplasm. Is expressed in organism. Orthologous to human NKRF (NFKB repressing factor). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See CG31301 in Genome Data Viewer
Location:
88F1-88F1; 3-57 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15346205..15348012)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11171927..11173734)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene N-acetylglucosamine kinase Neighboring gene Seryl-tRNA synthetase, mitochondrial Neighboring gene Surfeit 4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene TRAPP subunit 33 Neighboring gene Transmembrane O-mannosyltransferase targeting cadherins 4 Neighboring gene Autophagy-related 4b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomics identification of Drosophila small interfering RNA-associated factors. Gerbasi VR, et al. Mol Cell Proteomics, 2010 Sep. PMID 20472918, Free PMC Article
  2. An endogenous small interfering RNA pathway in Drosophila. Czech B, et al. Nature, 2008 Jun 5. PMID 18463631, Free PMC Article
  3. Automated identification of putative methyltransferases from genomic open reading frames. Katz JE, et al. Mol Cell Proteomics, 2003 Aug. PMID 12872006
  4. A gain-of-function screen identifying genes required for vein formation in the Drosophila melanogaster wing. Molnar C, et al. Genetics, 2006 Nov. PMID 16980395, Free PMC Article
  5. Comparative genomics and evolution of proteins involved in RNA metabolism. Anantharaman V, et al. Nucleic Acids Res, 2002 Apr 1. PMID 11917006, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG31301-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    15346205..15348012
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142192.4 → NP_650449.1  uncharacterized protein Dmel_CG31301 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650449.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960V5, Q9VF83
    Related
    FBpp0082543
    Conserved Domains (3) summary
    cd02640
    Location:331 → 390
    R3H_NRF; R3H domain of the NF-kappaB-repression factor (NRF). NRF is a nuclear inhibitor of NF-kappaB proteins that can silence the IFNbeta promoter via binding to a negative regulatory element (NRE). Beside R3H NRF also contains a G-patch domain. The name of the ...
    smart00443
    Location:280 → 323
    G_patch; glycine rich nucleic binding domain
    pfam11952
    Location:34 → 118
    XTBD; XRN-Two Binding Domain, XTBD
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VF83 Q9VF83

Gene LinkOut

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