DMTF1 cyclin D binding myb like transcription factor 1 [Gallus gallus (chicken)] - Gene

Summary

Symbol: DMTF1provided by CGNC
Full Name: cyclin D binding myb like transcription factor 1provided by CGNC
Primary source: CGNC:50816
See related: Ensembl:ENSGALG00010006064
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 18

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	1	NC_052532.1 (8083881..8112305, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	1	NC_052573.1 (8201664..8230093, complement)

Chromosome 1 - NC_052532.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: cyclin-D-binding Myb-like transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001080863.4 → NP_001074332.2 cyclin-D-binding Myb-like transcription factor 1

Status: VALIDATED

Source sequence(s)

JAENSK010000011

UniProtKB/TrEMBL

A0A1D5NYR7

Related

ENSGALP00010008523.1, ENSGALT00010014506.1

Conserved Domains (3) summary

pfam00249
Location:273 → 328

Myb_DNA-binding; Myb-like DNA-binding domain

pfam13921
Location:227 → 283

Myb_DNA-bind_6; Myb-like DNA-binding domain

cl28544
Location:113 → 377

SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

8083881..8112305 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046940797.1 → XP_046796753.1 cyclin-D-binding Myb-like transcription factor 1 isoform X1

UniProtKB/TrEMBL

A0A1D5NYR7
XM_015295524.4 → XP_015151010.1 cyclin-D-binding Myb-like transcription factor 1 isoform X2

Conserved Domains (4) summary

smart00717
Location:120 → 176

SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

cd00167
Location:184 → 234

SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

pfam00249
Location:120 → 175

Myb_DNA-binding; Myb-like DNA-binding domain

pfam13921
Location:74 → 130

Myb_DNA-bind_6; Myb-like DNA-binding domain

RNA

XR_005859123.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

8201664..8230093 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046908015.1 → XP_046763971.1 cyclin-D-binding Myb-like transcription factor 1 isoform X1

UniProtKB/TrEMBL

A0A1D5NYR7
XM_046908017.1 → XP_046763973.1 cyclin-D-binding Myb-like transcription factor 1 isoform X2