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mRpL9 mitochondrial ribosomal protein L9 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41859, updated on 18-Sep-2024

Summary

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Official Symbol
mRpL9provided by FlyBase
Official Full Name
mitochondrial ribosomal protein L9provided by FlyBase
Primary source
FLYBASE:FBgn0038319
Locus tag
Dmel_CG31478
See related
AllianceGenome:FB:FBgn0038319
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG31478; CG4923; Dmel\CG31478; L9; mRPL9
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be part of mitochondrial large ribosomal subunit. Predicted to be active in mitochondrion. Is expressed in several structures, including embryonic Malpighian tubule; extended germ band embryo; foregut primordium; germ layer; and gut section. Orthologous to human MRPL9 (mitochondrial ribosomal protein L9). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

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See mRpL9 in Genome Data Viewer
Location:
88F1-88F1; 3-57 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15330738..15331588)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11156460..11157310)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene easter Neighboring gene FK506-binding protein 39kD Neighboring gene Cytoplasmic FMR1 interacting protein Neighboring gene N-acetylglucosamine kinase Neighboring gene Seryl-tRNA synthetase, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immunopurification of Ago1 miRNPs selects for a distinct class of microRNA targets. Hong X, et al. Proc Natl Acad Sci U S A, 2009 Sep 1. PMID 19706460, Free PMC Article
  2. Structural compensation for the deficit of rRNA with proteins in the mammalian mitochondrial ribosome. Systematic analysis of protein components of the large ribosomal subunit from mammalian mitochondria. Suzuki T, et al. J Biol Chem, 2001 Jun 15. PMID 11279069
  3. The mitochondrial outer membrane protein MDI promotes local protein synthesis and mtDNA replication. Zhang Y, et al. EMBO J, 2016 May 17. PMID 27053724, Free PMC Article
  4. The ribosomal protein genes and Minute loci of Drosophila melanogaster. Marygold SJ, et al. Genome Biol, 2007. PMID 17927810, Free PMC Article
  5. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial translation TAS
Traceable Author Statement
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
involved_in translation TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
  
part_of mitochondrial large ribosomal subunit TAS
Traceable Author Statement
more info
 PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
mitochondrial ribosomal protein L9
Names
CG31478-PA
mRpL9-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    15330738..15331588
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079639.5 → NP_524363.3  mitochondrial ribosomal protein L9 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524363.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VF89
    Related
    FBpp0082540
    Conserved Domains (1) summary
    pfam01281
    Location:69 → 114
    Ribosomal_L9_N; Ribosomal protein L9, N-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VF89.1 Q9VF89

Gene LinkOut

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