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SMG8 SMG8 nonsense mediated mRNA decay factor [ Gallus gallus (chicken) ]

Gene ID: 417630, updated on 17-Aug-2024

Summary

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Official Symbol
SMG8provided by CGNC
Official Full Name
SMG8 nonsense mediated mRNA decay factorprovided by CGNC
Primary source
CGNC:3791
See related
Ensembl:ENSGALG00010029929
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
C17orf71
Orthologs
human mouse all
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Genomic context

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See SMG8 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (7684643..7690046)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (7421403..7426830)

Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene spindle and kinetochore associated complex subunit 2 pseudogene 1 Neighboring gene microRNA 130c Neighboring gene proline rich 11 Neighboring gene uncharacterized LOC121107279 Neighboring gene glycerophosphodiester phosphodiesterase domain containing 1 Neighboring gene yippee like 2 Neighboring gene microRNA 1697

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SMG8
Names
amplified in breast cancer gene 2 protein
protein smg-8 homolog
smg-8 homolog, nonsense mediated mRNA decay factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7684643..7690046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_415875.8 → XP_415875.7  protein SMG8 isoform X1

    Related
    ENSGALP00010044802.1, ENSGALT00010072335.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7421403..7426830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040687351.2 → XP_040543285.2  protein SMG8 isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials