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SEPTIN5 septin 5 [ Gallus gallus (chicken) ]

Gene ID: 416778, updated on 17-Aug-2024

Summary

Official Symbol
SEPTIN5provided by CGNC
Official Full Name
septin 5provided by CGNC
Primary source
CGNC:1177
See related
Ensembl:ENSGALG00010024509
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SEPT5; SEP-05; septin-5
Orthologs
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Genomic context

See SEPTIN5 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (764367..801646)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (769812..807094)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene septin 2 like Neighboring gene claudin 5 Neighboring gene uncharacterized LOC121106877 Neighboring gene microRNA mir-12226 Neighboring gene microRNA 1673 Neighboring gene microRNA 1729 Neighboring gene glycoprotein Ib platelet beta subunit Neighboring gene T-box 1 Neighboring gene uncharacterized LOC121106879

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of exocytosis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
septin-5
NP_001025825.2
NP_001383243.1
NP_001383244.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030654.3NP_001025825.2  septin-5 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000260
    UniProtKB/TrEMBL
    A0A8V0ZSR6, A0A8V0ZSS5
    Related
    ENSGALP00010036553.1, ENSGALT00010059793.1
    Conserved Domains (1) summary
    pfam00735
    Location:42313
    Septin
  2. NM_001396314.1NP_001383243.1  septin-5 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000260
    UniProtKB/TrEMBL
    A0A8V0ZSR6, F1NVL5
    Related
    ENSGALP00010036556.1, ENSGALT00010059796.1
    Conserved Domains (1) summary
    cd01850
    Location:41315
    CDC_Septin; CDC/Septin GTPase family
  3. NM_001396315.1NP_001383244.1  septin-5 isoform 3

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000260
    UniProtKB/TrEMBL
    A0A8V0ZSR6, A0A8V1A040
    Related
    ENSGALP00010036547.1, ENSGALT00010059787.1
    Conserved Domains (1) summary
    pfam00735
    Location:54325
    Septin

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    764367..801646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    769812..807094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)