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SLC25A1 solute carrier family 25 member 1 [ Gallus gallus (chicken) ]

Gene ID: 416764, updated on 17-Aug-2024

Summary

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Official Symbol
SLC25A1provided by CGNC
Official Full Name
solute carrier family 25 member 1provided by CGNC
Primary source
CGNC:846
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SLC25A1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (45647..59382, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (51218..64953, complement)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107049678 Neighboring gene uncharacterized LOC121106898 Neighboring gene uncharacterized LOC121106875 Neighboring gene U6 spliceosomal RNA Neighboring gene clathrin, heavy chain-like 1 Neighboring gene synaptosome associated protein 29

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial citrate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tricarboxylate transport protein, mitochondrial
Names
solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    45647..59382 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025155588.3 → XP_025011356.1  tricarboxylate transport protein, mitochondrial isoform X1

    Conserved Domains (1) summary
    pfam00153
    Location:226 → 316
    Mito_carr; Mitochondrial carrier protein

  2. XM_415059.8 → XP_415059.2  tricarboxylate transport protein, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A1D5PX68
    Conserved Domains (2) summary
    PTZ00169
    Location:29 → 303
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:23 → 113
    Mito_carr; Mitochondrial carrier protein

RNA

  1. XR_006931541.1 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    51218..64953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040684236.2 → XP_040540170.1  tricarboxylate transport protein, mitochondrial isoform X1

    Conserved Domains (1) summary
    pfam00153
    Location:226 → 316
    Mito_carr; Mitochondrial carrier protein

  2. XM_040684237.2 → XP_040540171.1  tricarboxylate transport protein, mitochondrial isoform X2

    Conserved Domains (2) summary
    PTZ00169
    Location:29 → 303
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:23 → 113
    Mito_carr; Mitochondrial carrier protein

RNA

  1. XR_006936309.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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