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COPS3 COP9 signalosome subunit 3 [ Gallus gallus (chicken) ]

Gene ID: 416504, updated on 10-Oct-2024

Summary

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Symbol
COPS3provided by CGNC
Full Name
COP9 signalosome subunit 3provided by CGNC
Primary source
CGNC:3588
See related
Ensembl:ENSGALG00010021723
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CSN3
Orthologs
human mouse all
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Genomic context

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See COPS3 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (4749655..4760856, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (4744260..4755467, complement)

Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene myosin phosphatase Rho interacting protein Neighboring gene phospholipase D family member 6 Neighboring gene folliculin Neighboring gene 5',3'-nucleotidase, mitochondrial Neighboring gene uncharacterized LOC124417208 Neighboring gene mediator complex subunit 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COP9 signalosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
COP9 signalosome complex subunit 3
Names
COP9 constitutive photomorphogenic homolog subunit 3
signalosome subunit 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006163.2 → NP_001006163.1  COP9 signalosome complex subunit 3

    See identical proteins and their annotated locations for NP_001006163.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000257
    UniProtKB/Swiss-Prot
    Q5ZJF1
    UniProtKB/TrEMBL
    A0A8V0ZEH8
    Related
    ENSGALP00010031708.1, ENSGALT00010052802.1
    Conserved Domains (1) summary
    pfam01399
    Location:259 → 362
    PCI; PCI domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4749655..4760856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015294174.4 → XP_015149660.1  COP9 signalosome complex subunit 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZEH8
    Related
    ENSGALP00010031699.1, ENSGALT00010052793.1
    Conserved Domains (1) summary
    pfam01399
    Location:239 → 342
    PCI; PCI domain

  2. XM_015294175.4 → XP_015149661.1  COP9 signalosome complex subunit 3 isoform X2

    Conserved Domains (1) summary
    pfam01399
    Location:129 → 232
    PCI; PCI domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4744260..4755467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046927361.1 → XP_046783317.1  COP9 signalosome complex subunit 3 isoform X1

  2. XM_046927362.1 → XP_046783318.1  COP9 signalosome complex subunit 3 isoform X2

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZJF1.1 GenPept UniProtKB/Swiss-Prot:Q5ZJF1

Gene LinkOut

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