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Ravus ravus [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41626, updated on 2-Nov-2024

Summary

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Official Symbol
Ravusprovided by FlyBase
Official Full Name
ravusprovided by FlyBase
Primary source
FLYBASE:FBgn0038128
Locus tag
Dmel_CG15889
See related
AllianceGenome:FB:FBgn0038128
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG15889; Dmel\CG15889
Summary
Predicted to enable DNA binding activity. Located in chromatin. Is expressed in organism. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See Ravus in Genome Data Viewer
Location:
87E3-87E3; 3-53 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (13262733..13264061, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (9088455..9089783, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Acetylcholine esterase Neighboring gene uncharacterized protein Neighboring gene Suppressor of variegation 3-7 Neighboring gene TBC1 domain family member 5 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new gene in Drosophila melanogaster, Ravus, the phantom of the modifier of position-effect variegation Su(var)3-7. Delattre M, et al. Int J Dev Biol, 2002 Jan. PMID 11902679
  2. The BET protein FSH functionally interacts with ASH1 to orchestrate global gene activity in Drosophila. Kockmann T, et al. Genome Biol, 2013 Feb 25. PMID 23442797, Free PMC Article
  3. Dynamics of Dark-Fly Genome Under Environmental Selections. Izutsu M, et al. G3 (Bethesda), 2015 Dec 4. PMID 26637434, Free PMC Article
  4. Inhibitory activities of short linear motifs underlie Hox interactome specificity in vivo. Baëza M, et al. Elife, 2015 Apr 14. PMID 25869471, Free PMC Article
  5. Generation of a versatile BiFC ORFeome library for analyzing protein-protein interactions in live Drosophila. Bischof J, et al. Elife, 2018 Sep 24. PMID 30247122, Free PMC Article

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Ravus cloning and expression in Drosophila
    Title: A new gene in Drosophila melanogaster, Ravus, the phantom of the modifier of position-effect variegation Su(var)3-7.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chromatin IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
ravus
Names
CG15889-PA
Ravus-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    13262733..13264061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_169498.3 → NP_731779.1  ravus [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_731779.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VFX8
    Related
    FBpp0082247
    Conserved Domains (1) summary
    pfam02944
    Location:278 → 312
    BESS; BESS motif
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8MRD3 Q8MRD3
Q9VFX8 Q9VFX8

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
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