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FOXP1 forkhead box P1 [ Gallus gallus (chicken) ]

Gene ID: 416092, updated on 10-Oct-2024

Summary

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Official Symbol
FOXP1provided by CGNC
Official Full Name
forkhead box P1provided by CGNC
Primary source
CGNC:50159
See related
Ensembl:ENSGALG00010022171
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
FOXP3
Orthologs
human mouse all
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Genomic context

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See FOXP1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
42
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 12 NC_052543.1 (16088760..16432211, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 12 NC_052584.1 (16122303..16465642, complement)

Chromosome 12 - NC_052543.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC427595 Neighboring gene MyoD family inhibitor domain containing 2 Neighboring gene uncharacterized LOC101748427 Neighboring gene uncharacterized LOC112533349 Neighboring gene uncharacterized LOC121106596 Neighboring gene eukaryotic translation initiation factor 4E family member 3 Neighboring gene G protein-coupled receptor 27 Neighboring gene prokineticin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Motor neurons with limb-innervating character in the cervical spinal cord are sculpted by apoptosis based on the Hox code in chick embryo. Mukaigasa K, et al. Development, 2017 Dec 15. PMID 29061638
  2. Identification of potential human oncogenes by mapping the common viral integration sites in avian nephroblastoma. Pajer P, et al. Cancer Res, 2006 Jan 1. PMID 16397219
  3. Foxp1 and lhx1 coordinate motor neuron migration with axon trajectory choice by gating Reelin signalling. Palmesino E, et al. PLoS Biol, 2010 Aug 10. PMID 20711475, Free PMC Article
  4. Hox repertoires for motor neuron diversity and connectivity gated by a single accessory factor, FoxP1. Dasen JS, et al. Cell, 2008 Jul 25. PMID 18662545
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein P1
Names
forkhead box P3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001024827.2 → NP_001019998.2  forkhead box protein P1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000252
    UniProtKB/TrEMBL
    A0A8V0ZNW2
    Related
    ENSGALP00010032502.1, ENSGALT00010053960.1
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  2. NM_001398198.1 → NP_001385127.1  forkhead box protein P1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000252
    Conserved Domains (2) summary
    smart00339
    Location:367 → 439
    FH; FORKHEAD
    COG5025
    Location:339 → 528
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  3. NM_001398199.1 → NP_001385128.1  forkhead box protein P1 isoform 3

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000252
    Conserved Domains (2) summary
    smart00339
    Location:366 → 438
    FH; FORKHEAD
    COG5025
    Location:338 → 527
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052543.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    16088760..16432211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040646262.2 → XP_040502196.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Related
    ENSGALP00010032509.1, ENSGALT00010053972.1
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  2. XM_046899979.1 → XP_046755935.1  forkhead box protein P1 isoform X7

  3. XM_015293120.4 → XP_015148606.2  forkhead box protein P1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZGP6, A0A8V0ZGQ4
    Conserved Domains (2) summary
    smart00339
    Location:430 → 502
    FH; FORKHEAD
    COG5025
    Location:402 → 591
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  4. XM_015293117.4 → XP_015148603.2  forkhead box protein P1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZM19
    Conserved Domains (2) summary
    smart00339
    Location:473 → 545
    FH; FORKHEAD
    COG5025
    Location:445 → 634
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  5. XM_015293114.4 → XP_015148600.2  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  6. XM_040646280.2 → XP_040502214.1  forkhead box protein P1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZM24
    Related
    ENSGALP00010032490.1, ENSGALT00010053944.1
    Conserved Domains (2) summary
    smart00339
    Location:472 → 544
    FH; FORKHEAD
    COG5025
    Location:445 → 633
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  7. XM_040646274.2 → XP_040502208.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  8. XM_046899966.1 → XP_046755922.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  9. XM_046899967.1 → XP_046755923.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  10. XM_046899976.1 → XP_046755932.1  forkhead box protein P1 isoform X2

  11. XM_040646261.2 → XP_040502195.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  12. XM_046899968.1 → XP_046755924.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  13. XM_046899964.1 → XP_046755920.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  14. XM_046899965.1 → XP_046755921.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  15. XM_046899970.1 → XP_046755926.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  16. XM_046899969.1 → XP_046755925.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  17. XM_046899962.1 → XP_046755918.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  18. XM_046899963.1 → XP_046755919.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  19. XM_040646279.2 → XP_040502213.1  forkhead box protein P1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZM19
    Related
    ENSGALP00010032504.1, ENSGALT00010053965.1
    Conserved Domains (2) summary
    smart00339
    Location:473 → 545
    FH; FORKHEAD
    COG5025
    Location:445 → 634
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  20. XM_040646267.2 → XP_040502201.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  21. XM_040646270.2 → XP_040502204.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  22. XM_040646269.2 → XP_040502203.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  23. XM_040646266.2 → XP_040502200.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  24. XM_046899974.1 → XP_046755930.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  25. XM_046899980.1 → XP_046755936.1  forkhead box protein P1 isoform X7

  26. XM_046899977.1 → XP_046755933.1  forkhead box protein P1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZGQ4
    Related
    ENSGALP00010032498.1, ENSGALT00010053954.1

  27. XM_015293115.4 → XP_015148601.2  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  28. XM_046899973.1 → XP_046755929.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  29. XM_046899972.1 → XP_046755928.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  30. XM_040646277.2 → XP_040502211.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  31. XM_040646265.2 → XP_040502199.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  32. XM_046899975.1 → XP_046755931.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZNW2

  33. XM_040646272.2 → XP_040502206.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Related
    ENSGALP00010032485.1, ENSGALT00010053937.1
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  34. XM_040646278.2 → XP_040502212.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM19, A0A8V0ZNW2
    Conserved Domains (2) summary
    smart00339
    Location:474 → 546
    FH; FORKHEAD
    COG5025
    Location:446 → 635
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  35. XM_046899981.1 → XP_046755937.1  forkhead box protein P1 isoform X7

  36. XM_046899982.1 → XP_046755938.1  forkhead box protein P1 isoform X7

    Related
    ENSGALP00010032475.1, ENSGALT00010053924.1

  37. XM_046899983.1 → XP_046755939.1  forkhead box protein P1 isoform X7

  38. XM_046899984.1 → XP_046755940.1  forkhead box protein P1 isoform X7

  39. XM_025154493.3 → XP_025010261.2  forkhead box protein P1 isoform X9

    UniProtKB/TrEMBL
    A0A8V0ZM07
    Conserved Domains (2) summary
    smart00339
    Location:366 → 438
    FH; FORKHEAD
    COG5025
    Location:338 → 527
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  40. XM_040646282.2 → XP_040502216.1  forkhead box protein P1 isoform X7

    UniProtKB/TrEMBL
    A0A8V0ZM07
    Conserved Domains (2) summary
    smart00339
    Location:367 → 439
    FH; FORKHEAD
    COG5025
    Location:339 → 528
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  41. XM_040646285.2 → XP_040502219.1  forkhead box protein P1 isoform X10

    UniProtKB/TrEMBL
    A0A8V0ZM07
    Conserved Domains (2) summary
    smart00339
    Location:365 → 437
    FH; FORKHEAD
    COG5025
    Location:338 → 526
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  42. XM_040646283.2 → XP_040502217.1  forkhead box protein P1 isoform X8

    UniProtKB/TrEMBL
    A0A8V0ZM07
    Conserved Domains (2) summary
    smart00339
    Location:366 → 438
    FH; FORKHEAD
    COG5025
    Location:339 → 527
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  43. XM_025154492.3 → XP_025010260.2  forkhead box protein P1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0ZM07
    Conserved Domains (2) summary
    smart00339
    Location:397 → 469
    FH; FORKHEAD
    COG5025
    Location:369 → 558
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  44. XM_046899985.1 → XP_046755941.1  forkhead box protein P1 isoform X7

  45. XM_046899978.1 → XP_046755934.1  forkhead box protein P1 isoform X6

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052584.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    16122303..16465642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046926424.1 → XP_046782380.1  forkhead box protein P1 isoform X1

  2. XM_046926460.1 → XP_046782416.1  forkhead box protein P1 isoform X7

  3. XM_046926456.1 → XP_046782412.1  forkhead box protein P1 isoform X4

  4. XM_046926452.1 → XP_046782408.1  forkhead box protein P1 isoform X2

  5. XM_046926425.1 → XP_046782381.1  forkhead box protein P1 isoform X1

  6. XM_046926454.1 → XP_046782410.1  forkhead box protein P1 isoform X3

  7. XM_046926432.1 → XP_046782388.1  forkhead box protein P1 isoform X1

  8. XM_046926433.1 → XP_046782389.1  forkhead box protein P1 isoform X1

  9. XM_046926434.1 → XP_046782390.1  forkhead box protein P1 isoform X1

  10. XM_046926451.1 → XP_046782407.1  forkhead box protein P1 isoform X2

  11. XM_046926423.1 → XP_046782379.1  forkhead box protein P1 isoform X1

  12. XM_046926435.1 → XP_046782391.1  forkhead box protein P1 isoform X1

  13. XM_046926430.1 → XP_046782386.1  forkhead box protein P1 isoform X1

  14. XM_046926428.1 → XP_046782384.1  forkhead box protein P1 isoform X1

  15. XM_046926439.1 → XP_046782395.1  forkhead box protein P1 isoform X1

  16. XM_046926437.1 → XP_046782393.1  forkhead box protein P1 isoform X1

  17. XM_046926429.1 → XP_046782385.1  forkhead box protein P1 isoform X1

  18. XM_046926453.1 → XP_046782409.1  forkhead box protein P1 isoform X2

  19. XM_046926441.1 → XP_046782397.1  forkhead box protein P1 isoform X1

  20. XM_046926444.1 → XP_046782400.1  forkhead box protein P1 isoform X1

  21. XM_046926443.1 → XP_046782399.1  forkhead box protein P1 isoform X1

  22. XM_046926440.1 → XP_046782396.1  forkhead box protein P1 isoform X1

  23. XM_046926442.1 → XP_046782398.1  forkhead box protein P1 isoform X1

  24. XM_046926461.1 → XP_046782417.1  forkhead box protein P1 isoform X7

  25. XM_046926455.1 → XP_046782411.1  forkhead box protein P1 isoform X4

  26. XM_046926426.1 → XP_046782382.1  forkhead box protein P1 isoform X1

  27. XM_046926447.1 → XP_046782403.1  forkhead box protein P1 isoform X1

  28. XM_046926446.1 → XP_046782402.1  forkhead box protein P1 isoform X1

  29. XM_046926445.1 → XP_046782401.1  forkhead box protein P1 isoform X1

  30. XM_046926436.1 → XP_046782392.1  forkhead box protein P1 isoform X1

  31. XM_046926449.1 → XP_046782405.1  forkhead box protein P1 isoform X1

  32. XM_046926450.1 → XP_046782406.1  forkhead box protein P1 isoform X1

  33. XM_046926431.1 → XP_046782387.1  forkhead box protein P1 isoform X1

  34. XM_046926448.1 → XP_046782404.1  forkhead box protein P1 isoform X1

  35. XM_046926462.1 → XP_046782418.1  forkhead box protein P1 isoform X7

  36. XM_046926463.1 → XP_046782419.1  forkhead box protein P1 isoform X7

  37. XM_046926464.1 → XP_046782420.1  forkhead box protein P1 isoform X7

  38. XM_046926422.1 → XP_046782378.1  forkhead box protein P1 isoform X9

  39. XM_046926421.1 → XP_046782377.1  forkhead box protein P1 isoform X8

  40. XM_046926420.1 → XP_046782376.1  forkhead box protein P1 isoform X7

  41. XM_046926465.1 → XP_046782421.1  forkhead box protein P1 isoform X7

  42. XM_046926459.1 → XP_046782415.1  forkhead box protein P1 isoform X7

  43. XM_046926468.1 → XP_046782424.1  forkhead box protein P1 isoform X10

  44. XM_046926467.1 → XP_046782423.1  forkhead box protein P1 isoform X8

  45. XM_046926457.1 → XP_046782413.1  forkhead box protein P1 isoform X5

  46. XM_046926466.1 → XP_046782422.1  forkhead box protein P1 isoform X7

  47. XM_046926458.1 → XP_046782414.1  forkhead box protein P1 isoform X6

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q58NQ4.1 GenPept UniProtKB/Swiss-Prot:Q58NQ4

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