LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated [Gallus gallus (chicken)] - Gene

Summary

Symbol: LSM3provided by CGNC
Full Name: LSM3 homolog, U6 small nuclear RNA and mRNA degradation associatedprovided by CGNC
Primary source: CGNC:66246
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 12

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	12	NC_052543.1 (10981792..10984175)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	12	NC_052584.1 (11009856..11012257)

Chromosome 12 - NC_052543.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in P-body assembly	IEA Inferred from Electronic Annotation more info	PubMed
involved_in mRNA splicing, via spliceosome	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of Lsm1-7-Pat1 complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in P-body	IEA Inferred from Electronic Annotation more info	PubMed
part_of U4/U6 x U5 tri-snRNP complex	IEA Inferred from Electronic Annotation more info	PubMed
part_of U6 snRNP	IEA Inferred from Electronic Annotation more info	PubMed
part_of catalytic step 2 spliceosome	IEA Inferred from Electronic Annotation more info	PubMed
part_of precatalytic spliceosome	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: U6 snRNA-associated Sm-like protein LSm3

Names: LSM3 homolog, U6 small nuclear RNA associated

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.