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psmd8.L proteasome 26S subunit, non-ATPase 8 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 414721, updated on 18-Sep-2024

Summary

Official Symbol
psmd8.L
Official Full Name
proteasome 26S subunit, non-ATPase 8 L homeolog
Primary source
Xenbase:XB-GENE-961860
Locus tag
XELAEV_18039369mg
See related
EnsemblRapid:ENSXLAG00005021043
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
hip6; hypf; nin1p; psmd8; rpn12; psmd8a; psmd8-a; psmd8-b
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Genomic context

See psmd8.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (71437571..71449374)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (57947855..57959667)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 8 member A2 L homeolog Neighboring gene Meis homeobox 3 L homeolog Neighboring gene sprouty related, EVH1 domain containing 3 L homeolog Neighboring gene family with sequence similarity 98 member A L homeolog Neighboring gene RAS guanyl releasing protein 4 L homeolog

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within proteolysis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
part_of proteasome complex IEA
Inferred from Electronic Annotation
more info
 
part_of proteasome regulatory particle IEA
Inferred from Electronic Annotation
more info
 
part_of proteasome regulatory particle, lid subcomplex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
proteasome 26S non-ATPase subunit 8 a
Names
proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091280.1NP_001084749.1  proteasome 26S non-ATPase subunit 8 a

    See identical proteins and their annotated locations for NP_001084749.1

    Status: PROVISIONAL

    Source sequence(s)
    BC133237
    UniProtKB/TrEMBL
    A0A974H7U7, A2RV94
    Related
    ENSXLAP00005061793.1, ENSXLAT00005063246.1
    Conserved Domains (1) summary
    pfam10075
    Location:122234
    CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    71437571..71449374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)