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cox6c.S cytochrome c oxidase subunit VIc S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 414706, updated on 18-Sep-2024

Summary

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Official Symbol
cox6c.S
Official Full Name
cytochrome c oxidase subunit VIc S homeolog
Primary source
Xenbase:XB-GENE-17345295
Locus tag
XELAEV_18033885mg
See related
EnsemblRapid:ENSXLAG00005004241
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cox6ca; cox6c.1
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Genomic context

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See cox6c.S in Genome Data Viewer
Location:
chromosome: 6S
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6S NC_054382.1 (114279176..114286171)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (105624485..105631590)

Chromosome 6S - NC_054382.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 46 S homeolog Neighboring gene sorting nexin 31 S homeolog Neighboring gene vacuolar protein sorting-associated protein 13B-like Neighboring gene odd-skipped related transcription factor 2 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83130

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within mitochondrial electron transport, cytochrome c to oxygen IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within oxidative phosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
cytochrome c oxidase subunit VIc
Names
cytochrome c oxidase subunit VIc a
NP_001165172.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001171701.1 → NP_001165172.1  cytochrome c oxidase subunit VIc

    See identical proteins and their annotated locations for NP_001165172.1

    Status: PROVISIONAL

    Source sequence(s)
    BC068914
    UniProtKB/TrEMBL
    A0A974HEF7, Q6NTP3
    Related
    ENSXLAP00005012677.1, ENSXLAT00005012856.1
    Conserved Domains (1) summary
    cd00927
    Location:5 → 74
    Cyt_c_Oxidase_VIc; Cytochrome c oxidase subunit VIc. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    114279176..114286171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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