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gfpt1.S glutamine--fructose-6-phosphate transaminase 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 414702, updated on 17-Aug-2024

Summary

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Official Symbol
gfpt1.S
Official Full Name
glutamine--fructose-6-phosphate transaminase 1 S homeolog
Primary source
Xenbase:XB-GENE-866299
Locus tag
XELAEV_18020350mg
See related
EnsemblRapid:ENSXLAG00005015636
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
gfat; gfpt1
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Genomic context

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See gfpt1.S in Genome Data Viewer
Location:
chromosome: 3S
Exon count:
19
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (30995731..31029554, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (29854754..29888531, complement)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene gastrokine-1 Neighboring gene ANTXR cell adhesion molecule 1 S homeolog Neighboring gene NFU1 iron-sulfur cluster scaffold S homeolog Neighboring gene AP2 associated kinase 1 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83201

General protein information

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Preferred Names
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glutamine--fructose-6-phosphate transaminase 1 S homeolog
Names
glutamine-fructose-6-phosphate transaminase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    30995731..31029554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041588158.1 → XP_041444092.1  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1

    UniProtKB/TrEMBL
    A0A974D6V1, Q6NTL6
    Related
    ENSXLAP00005045948.1, ENSXLAT00005047047.1
    Conserved Domains (1) summary
    PLN02981
    Location:1 → 681
    PLN02981; glucosamine:fructose-6-phosphate aminotransferase

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001091267.1: Suppressed sequence

    Description
    NM_001091267.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version

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