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nme4.L NME/NM23 nucleoside diphosphate kinase 4 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 414658, updated on 18-Sep-2024

Summary

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Official Symbol
nme4.L
Official Full Name
NME/NM23 nucleoside diphosphate kinase 4 L homeolog
Primary source
Xenbase:XB-GENE-5926545
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
nme4; nme4a; ndpk-d; nm23h4; nme4-a; nme4-b; NM23-X4; nm23-h4
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Genomic context

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See nme4.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (116190988..116201498, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (105587831..105598696, complement)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene RAB11 family interacting protein 3 (class II) L homeolog Neighboring gene 2,4-dienoyl-CoA reductase 2 L homeolog Neighboring gene exportin 6 L homeolog Neighboring gene 1.L

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Xenopus NM23-X4 regulates retinal gliogenesis through interaction with p27Xic1. Mochizuki T, et al. Neural Dev, 2009 Jan 5. PMID 19123928, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleoside diphosphate kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within CTP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within GTP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within UTP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
nucleoside diphosphate kinase 4
Names
non-metastatic cells 4, protein expressed in a
NP_001084697.1
XP_018089725.1
XP_041431506.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091228.1 → NP_001084697.1  nucleoside diphosphate kinase 4

    See identical proteins and their annotated locations for NP_001084697.1

    Status: PROVISIONAL

    Source sequence(s)
    BC068680
    UniProtKB/TrEMBL
    A0A974BVP4, Q6NUB6
    Conserved Domains (1) summary
    cd04413
    Location:35 → 164
    NDPk_I; Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    116190988..116201498 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041575572.1 → XP_041431506.1  nucleoside diphosphate kinase 4 isoform X1

    UniProtKB/TrEMBL
    A0A974BVP4, Q6NUB6
    Conserved Domains (1) summary
    cd04413
    Location:35 → 164
    NDPk_I; Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside ...

  2. XM_018234236.2 → XP_018089725.1  nucleoside diphosphate kinase 4 isoform X1

    UniProtKB/TrEMBL
    A0A974BVP4, Q6NUB6
    Conserved Domains (1) summary
    cd04413
    Location:35 → 164
    NDPk_I; Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside ...
Nucleotide Protein Strain
Heading Accession and Version

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