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tmem169.L transmembrane protein 169 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 414651, updated on 4-Nov-2024

Summary

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Official Symbol
tmem169.L
Official Full Name
transmembrane protein 169 L homeolog
Primary source
Xenbase:XB-GENE-6252285
Locus tag
XELAEV_18044411mg
See related
EnsemblRapid:ENSXLAG00005017263 AllianceGenome:Xenbase:XB-GENE-6252285
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tmem169
Summary
Predicted to be located in membrane. Orthologous to human TMEM169 (transmembrane protein 169). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See tmem169.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (59441182..59447372)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (48836820..48843283)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase 2 L homeolog Neighboring gene peroxisomal trans-2-enoyl-CoA reductase-like Neighboring gene X-ray repair complementing defective repair in Chinese hamster cells 5 L homeolog Neighboring gene membrane associated ring-CH-type finger 4 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC81142

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane protein 169 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091221.1 → NP_001084690.1  transmembrane protein 169 L homeolog

    See identical proteins and their annotated locations for NP_001084690.1

    Status: PROVISIONAL

    Source sequence(s)
    BC068709
    UniProtKB/TrEMBL
    A0A974BYG3, Q6NU88
    Conserved Domains (1) summary
    pfam15052
    Location:167 → 291
    TMEM169; TMEM169 protein family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    59441182..59447372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018234235.2 → XP_018089724.1  transmembrane protein 169 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974BYG3, Q6NU88
    Related
    ENSXLAP00005050893.1, ENSXLAT00005052055.1

  2. XM_018234234.2 → XP_018089723.1  transmembrane protein 169 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974BYG3, Q6NU88
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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