dctd.L dCMP deaminase L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: dctd.L
Official Full Name: dCMP deaminase L homeolog
Primary source: Xenbase:XB-GENE-6252550
Locus tag: XELAEV_18005389mg
See related: EnsemblRapid:ENSXLAG00005005556 AllianceGenome:Xenbase:XB-GENE-6252550
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: dctd
Summary: Predicted to enable hydrolase activity and zinc ion binding activity. Orthologous to human DCTD (dCMP deaminase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 1L

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1L	NC_054371.1 (47905319..47919479)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1L	NC_030724.1 (38661529..38675708)

Chromosome 1L - NC_054371.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: dCMP deaminase L homeolog

NP_001084625.1

EC 3.5.4.12

XP_018099336.1

EC 3.5.4.12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091156.1 → NP_001084625.1 dCMP deaminase L homeolog

See identical proteins and their annotated locations for NP_001084625.1

Status: PROVISIONAL

Source sequence(s)

BC068731

UniProtKB/TrEMBL

A0A974DXL4, Q6NU69

Related

ENSXLAP00005016399.1, ENSXLAT00005016695.1

Conserved Domains (1) summary

cd01286
Location:28 → 157

deoxycytidylate_deaminase; Deoxycytidylate deaminase domain. Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP, providing the nucleotide substrate for thymidylate synthase. The enzyme binds Zn++, which is required for catalytic activity. The activity of the ...