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anapc4.L anaphase promoting complex subunit 4 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 414530, updated on 4-Nov-2024

Summary

Official Symbol
anapc4.L
Official Full Name
anaphase promoting complex subunit 4 L homeolog
Primary source
Xenbase:XB-GENE-968793
Locus tag
XELAEV_18005182mg
See related
EnsemblRapid:ENSXLAG00005023625 AllianceGenome:Xenbase:XB-GENE-968793
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
anapc4
Summary
Predicted to act upstream of or within several processes, including anaphase-promoting complex-dependent catabolic process; protein K11-linked ubiquitination; and regulation of mitotic metaphase/anaphase transition. Predicted to be located in nuclear periphery. Predicted to be part of anaphase-promoting complex. Orthologous to human ANAPC4 (anaphase promoting complex subunit 4). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See anapc4.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
32
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (33656843..33689381, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (24453914..24486377, complement)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase L homeolog Neighboring gene phosphatidylinositol 4-kinase type 2 beta L homeolog Neighboring gene U2 spliceosomal RNA Neighboring gene solute carrier family 34 member 2 L homeolog

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
anaphase promoting complex subunit 4 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091109.2NP_001084578.1  anaphase promoting complex subunit 4 L homeolog

    See identical proteins and their annotated locations for NP_001084578.1

    Status: PROVISIONAL

    Source sequence(s)
    BC068765
    UniProtKB/TrEMBL
    Q6NU36
    Related
    ENSXLAP00005069935.1, ENSXLAT00005071470.1
    Conserved Domains (5) summary
    COG2319
    Location:19181
    WD40; WD40 repeat [General function prediction only]
    pfam12894
    Location:350
    ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain
    pfam12896
    Location:226424
    ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4
    sd00039
    Location:1952
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:19108
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    33656843..33689381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018243668.2XP_018099157.1  anaphase promoting complex subunit 4 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8HTH1, A0A974DWU7
  2. XM_018243693.2XP_018099182.1  anaphase promoting complex subunit 4 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8HTH1, A0A974DWU7
  3. XM_018243676.2XP_018099165.1  anaphase promoting complex subunit 4 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8HTH1, A0A974DWU7
  4. XM_018243684.2XP_018099173.1  anaphase promoting complex subunit 4 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8HTH1, A0A974DWU7