rpia.L ribose 5-phosphate isomerase A L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: rpia.L
Official Full Name: ribose 5-phosphate isomerase A L homeolog
Primary source: Xenbase:XB-GENE-995584
Locus tag: XELAEV_18004985mg
See related: EnsemblRapid:ENSXLAG00005020356
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: rpia
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: 1L

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1L	NC_054371.1 (18021707..18048086, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1L	NC_030724.1 (9214560..9240999, complement)

Chromosome 1L - NC_054371.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables isomerase activity	IEA Inferred from Electronic Annotation more info
enables ribose-5-phosphate isomerase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within D-ribose metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within pentose-phosphate shunt	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within pentose-phosphate shunt, non-oxidative branch	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within small molecule metabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in intracellular membrane-bounded organelle	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ribose 5-phosphate isomerase A L homeolog

NP_001084550.1

EC 5.3.1.6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091081.1 → NP_001084550.1 ribose 5-phosphate isomerase A L homeolog

See identical proteins and their annotated locations for NP_001084550.1

Status: PROVISIONAL

Source sequence(s)

BC068951

UniProtKB/TrEMBL

A0A974I2S1, Q6NTL0

Related

ENSXLAP00005059593.1, ENSXLAT00005061042.1

Conserved Domains (1) summary

cd01398
Location:5 → 222

RPI_A; RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. This reaction leads to the ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

18021707..18048086 complement

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GenBank, FASTA, Sequence Viewer (Graphics)