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CG12213 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41447, updated on 2-Nov-2024

Summary

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Official Symbol
CG12213provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0260742
Locus tag
Dmel_CG12213
See related
AllianceGenome:FB:FBgn0260742
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
87A7-9/3; anon-87Ab; Dmel\CG12213
Summary
Is expressed in adult head. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See CG12213 in Genome Data Viewer
Location:
87A3-87A3; 3-51 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11964674..11967691, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7790396..7793413, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Heat shock protein 70 Aa Neighboring gene Heat shock protein 70 Ab Neighboring gene uncharacterized protein Neighboring gene aurora A Neighboring gene Glutamate Carrier 1 Neighboring gene Transport and Golgi organization 9 Neighboring gene Glutamate Carrier 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Remarkable site specificity of local transposition into the Hsp70 promoter of Drosophila melanogaster. Shilova VY, et al. Genetics, 2006 Jun. PMID 16582443, Free PMC Article
  2. Mutations in aurora prevent centrosome separation leading to the formation of monopolar spindles. Glover DM, et al. Cell, 1995 Apr 7. PMID 7720077
  3. Identification of JAK/STAT signalling components by genome-wide RNA interference. Müller P, et al. Nature, 2005 Aug 11. PMID 16094372
  4. Genome-wide mapping of boundary element-associated factor (BEAF) binding sites in Drosophila melanogaster links BEAF to transcription. Jiang N, et al. Mol Cell Biol, 2009 Jul. PMID 19380483, Free PMC Article
  5. Mobile-phone radiation-induced perturbation of gene-expression profiling, redox equilibrium and sporadic-apoptosis control in the ovary of Drosophila melanogaster. Manta AK, et al. Fly (Austin), 2017 Apr 3. PMID 27960592, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG12213-PB
CG12213-PC
CG12213-PD
CG12213-PE
anon-87Ab

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    11964674..11967691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275560.1 → NP_001262489.1  uncharacterized protein Dmel_CG12213, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262489.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B8A412, Q8INJ4
    Conserved Domains (2) summary
    PTZ00108
    Location:146 → 367
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    pfam15921
    Location:33 → 213
    CCDC158; Coiled-coil domain-containing protein 158

  2. NM_169442.3 → NP_731654.2  uncharacterized protein Dmel_CG12213, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_731654.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    B8A412, Q9VGF8
    Conserved Domains (2) summary
    PTZ00108
    Location:146 → 378
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    pfam15921
    Location:33 → 213
    CCDC158; Coiled-coil domain-containing protein 158

  3. NM_001104284.2 → NP_001097754.1  uncharacterized protein Dmel_CG12213, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097754.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8JQY2, B8A412
    Conserved Domains (1) summary
    pfam15921
    Location:33 → 213
    CCDC158; Coiled-coil domain-containing protein 158

  4. NM_141876.4 → NP_650133.2  uncharacterized protein Dmel_CG12213, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650133.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    B8A412, Q8INJ4
    Conserved Domains (2) summary
    PTZ00108
    Location:146 → 367
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    pfam15921
    Location:33 → 213
    CCDC158; Coiled-coil domain-containing protein 158
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A8JQY2 A8JQY2
Q8INJ4 Q8INJ4
Q9VGF8 Q9VGF8

Gene LinkOut

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