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ubxn7.S UBX domain protein 7 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 414459, updated on 17-Aug-2024

Summary

Official Symbol
ubxn7.S
Official Full Name
UBX domain protein 7 S homeolog
Primary source
Xenbase:XB-GENE-5809980
Locus tag
XELAEV_18029961mg
See related
EnsemblRapid:ENSXLAG00005033217
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ubxd7; ubxn7
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Genomic context

Location:
chromosome: 5S
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5S NC_054380.1 (117114572..117133898)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5S NC_030733.1 (110362071..110381388)

Chromosome 5S - NC_054380.1Genomic Context describing neighboring genes Neighboring gene transcription factor Dp-2 S homeolog Neighboring gene ring finger protein 168, E3 ubiquitin protein ligase S homeolog Neighboring gene neuraminidase 4 (sialidase) S homeolog Neighboring gene galactose-3-O-sulfotransferase 2 S homeolog

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
UBX domain protein 7 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091043.1NP_001084512.1  UBX domain protein 7 S homeolog

    See identical proteins and their annotated locations for NP_001084512.1

    Status: PROVISIONAL

    Source sequence(s)
    BC068829
    UniProtKB/TrEMBL
    A0A974HIJ3, Q6NTX4
    Related
    ENSXLAP00005099329.1, ENSXLAT00005101209.1
    Conserved Domains (3) summary
    cd01773
    Location:407488
    Faf1_like1_UBX; Faf1 ike-1 UBX domain
    cd02958
    Location:145257
    UAS; UAS family; UAS is a domain of unknown function. Most members of this family are uncharacterized proteins with similarity to FAS-associated factor 1 (FAF1) and ETEA because of the presence of a UAS domain N-terminal to a ubiquitin-associated UBX domain. ...
    cd14345
    Location:1046
    UBA_UBXD7; UBA-like domain found in UBX domain-containing protein 7 (UBXD7) and similar proteins

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054380.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    117114572..117133898
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)