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LOC411720 mitogen-activated protein kinase kinase kinase 7 interacting protein 1 [ Apis mellifera (honey bee) ]

Gene ID: 411720, updated on 1-Oct-2024

Summary

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Gene symbol
LOC411720
Gene description
mitogen-activated protein kinase kinase kinase 7 interacting protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB18176; GB49496
Orthologs
all
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Genomic context

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See LOC411720 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
9
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG15 NC_037652.1 (3775592..3780805)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG15 NC_007084.3 (3742992..3748185)

Linkage Group LG15 - NC_037652.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 28 Neighboring gene protein app1-like Neighboring gene uncharacterized LOC107965626 Neighboring gene 4-hydroxybutyrate coenzyme A transferase Neighboring gene 4-hydroxybutyrate coenzyme A transferase-like Neighboring gene V-type proton ATPase subunit Vha55

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037652.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    3775592..3780805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006560685.3 → XP_006560748.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A7M7GVD5, A0A8B6YY65
    Conserved Domains (1) summary
    cd00143
    Location:60 → 373
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  2. XM_006560686.3 → XP_006560749.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A7M7GMJ5, A0A8B6YWL9
    Conserved Domains (1) summary
    cd00143
    Location:3 → 283
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  3. XM_016916766.2 → XP_016772255.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A7M7IJU7, A0A8B7KQV2
Nucleotide Protein Strain
Heading Accession and Version

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