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Atpalpha sodium/potassium-transporting ATPase subunit alpha [ Apis mellifera (honey bee) ]

Gene ID: 411083, updated on 2-Oct-2024

Summary

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Gene symbol
Atpalpha
Gene description
sodium/potassium-transporting ATPase subunit alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
Nak; Rpb8; GB42054
Orthologs
fruit fly all
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Genomic context

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See Atpalpha in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
14
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG5 NC_037642.1 (6883507..7002055)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG5 NC_007074.3 (6782461..6902000)

Linkage Group LG5 - NC_037642.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107964473 Neighboring gene uncharacterized LOC107964422 Neighboring gene NPC intracellular cholesterol transporter 2 Neighboring gene SDR family oxidoreductase shroud Neighboring gene microRNA mir-6044 Neighboring gene uncharacterized LOC113218806 Neighboring gene ribosomal RNA processing protein 36 homolog Neighboring gene DNA-directed RNA polymerases I, II, and III subunit Rpb8 Neighboring gene microRNA mir-317

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type sodium:potassium-exchanging transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular potassium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sodium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion export across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/potassium-transporting ATPase subunit alpha
Names
sodium potassium adenosine triphosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037642.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    6883507..7002055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026441031.1 → XP_026296816.1  sodium/potassium-transporting ATPase subunit alpha isoform X6

    UniProtKB/TrEMBL
    A0A7M7L4E3, A0A8B8GYI7
    Conserved Domains (1) summary
    TIGR01106
    Location:18 → 1014
    ATPase-IIC_X-K; sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

  2. XM_016912169.2 → XP_016767658.2  sodium/potassium-transporting ATPase subunit alpha isoform X3

    UniProtKB/TrEMBL
    A0A7M7IG16, A0A8B7KKX8
    Conserved Domains (1) summary
    TIGR01106
    Location:45 → 1041
    ATPase-IIC_X-K; sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

  3. XM_016912171.2 → XP_016767660.1  sodium/potassium-transporting ATPase subunit alpha isoform X9

    UniProtKB/TrEMBL
    A0A7M7IHQ2, A0A8B7KJ80

  4. XM_006564159.3 → XP_006564222.1  sodium/potassium-transporting ATPase subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A7M7GTH3, A0A8B6YZF2
    Conserved Domains (6) summary
    smart00831
    Location:58 → 132
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    COG4087
    Location:695 → 770
    COG4087; Soluble P-type ATPase [General function prediction only]
    TIGR01106
    Location:45 → 1041
    ATPase-IIC_X-K; sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit
    pfam00122
    Location:152 → 383
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:817 → 1025
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam13246
    Location:445 → 539
    Cation_ATPase; Cation transport ATPase (P-type)

  5. XM_006564160.3 → XP_006564223.1  sodium/potassium-transporting ATPase subunit alpha isoform X2

    UniProtKB/TrEMBL
    A0A7M7GYQ7, A0A8B6YZE1
    Conserved Domains (6) summary
    smart00831
    Location:58 → 132
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    COG4087
    Location:695 → 770
    COG4087; Soluble P-type ATPase [General function prediction only]
    TIGR01106
    Location:45 → 1041
    ATPase-IIC_X-K; sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit
    pfam00122
    Location:152 → 383
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:817 → 1025
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam13246
    Location:445 → 539
    Cation_ATPase; Cation transport ATPase (P-type)

  6. XM_026441032.1 → XP_026296817.1  sodium/potassium-transporting ATPase subunit alpha isoform X7

    UniProtKB/TrEMBL
    A0A7M7L721, A0A8B8GYN4
    Conserved Domains (1) summary
    TIGR01106
    Location:12 → 1008
    ATPase-IIC_X-K; sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

  7. XM_026441029.1 → XP_026296814.1  sodium/potassium-transporting ATPase subunit alpha isoform X4

    UniProtKB/TrEMBL
    A0A7M7L7L7, A0A8B8H160
    Conserved Domains (1) summary
    TIGR01106
    Location:39 → 1035
    ATPase-IIC_X-K; sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

  8. XM_026441033.1 → XP_026296818.1  sodium/potassium-transporting ATPase subunit alpha isoform X8

    UniProtKB/TrEMBL
    A0A7M7MKJ8, A0A8B8GZV7
    Conserved Domains (1) summary
    TIGR01106
    Location:9 → 1005
    ATPase-IIC_X-K; sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

  9. XM_026441030.1 → XP_026296815.1  sodium/potassium-transporting ATPase subunit alpha isoform X5

    UniProtKB/TrEMBL
    A0A7M7L2X9, A0A8B8GYJ0
    Conserved Domains (1) summary
    TIGR01106
    Location:36 → 1032
    ATPase-IIC_X-K; sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit
Nucleotide Protein Strain
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