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LOC410775 laminin subunit alpha-1 [ Apis mellifera (honey bee) ]

Gene ID: 410775, updated on 2-Oct-2024

Summary

Gene symbol
LOC410775
Gene description
laminin subunit alpha-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB53931
Orthologs
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Genomic context

See LOC410775 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
42
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG1 NC_037638.1 (25465942..25582039, complement)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG1 NC_007070.3 (27873107..27989078)

Linkage Group LG1 - NC_037638.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102654381 Neighboring gene glass bottom boat Neighboring gene calmodulin-regulated spectrin-associated protein patronin Neighboring gene uncharacterized LOC100578543 Neighboring gene uncharacterized LOC102655243 Neighboring gene uncharacterized LOC724993 Neighboring gene uncharacterized LOC107965104

Genomic regions, transcripts, and products

General protein information

Preferred Names
laminin subunit alpha-1; laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037638.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    25465942..25582039 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026442277.1XP_026298062.1  laminin subunit alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A7M7MM68, A0A8B8H245
    Conserved Domains (10) summary
    smart00180
    Location:938983
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:23422481
    LamG; Laminin G domain
    cd00055
    Location:638686
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:29143071
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:889940
    Laminin_EGF; Laminin EGF domain
    pfam00052
    Location:12151350
    Laminin_B; Laminin B (Domain IV)
    pfam00055
    Location:21236
    Laminin_N; Laminin N-terminal (Domain VI)
    pfam02210
    Location:27662890
    Laminin_G_2; Laminin G domain
    cl22861
    Location:21502288
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl25732
    Location:15962105
    SMC_N; RecF/RecN/SMC N terminal domain
  2. XM_026442281.1XP_026298066.1  laminin subunit alpha-2 isoform X2

    UniProtKB/TrEMBL
    A0A7M7MMF6, A0A8B8H249
    Conserved Domains (11) summary
    smart00180
    Location:837882
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:22412380
    LamG; Laminin G domain
    cd00055
    Location:13931427
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:28132970
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:788839
    Laminin_EGF; Laminin EGF domain
    pfam00052
    Location:11141249
    Laminin_B; Laminin B (Domain IV)
    pfam02210
    Location:26652789
    Laminin_G_2; Laminin G domain
    pfam07263
    Location:115543
    DMP1; Dentin matrix protein 1 (DMP1)
    pfam11255
    Location:126
    DUF3054; Protein of unknown function (DUF3054)
    cl22861
    Location:20492187
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl25732
    Location:14952004
    SMC_N; RecF/RecN/SMC N terminal domain