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alphaTub84D alpha-Tubulin at 84D [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40904, updated on 2-Nov-2024

Summary

Official Symbol
alphaTub84Dprovided by FlyBase
Official Full Name
alpha-Tubulin at 84Dprovided by FlyBase
Primary source
FLYBASE:FBgn0003885
Locus tag
Dmel_CG2512
See related
AllianceGenome:FB:FBgn0003885
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
3t; 84D; ALPHA 84D; alpha-tub; alpha-Tub; alpha-tub84D; alpha-Tub84D; alpha-tubulin; alpha3; alpha3t; alpha84D; alphaTub; alphaTUB; alphaTub3; alphaTub84; alphaTUB84D; AlphaTub84D; aTub84D; CG2512; D.m.ALPHA-84D; Dmel\CG2512; DTA4; FBgn0003884; T; Tub; Tub1A
Summary
Enables myosin binding activity. Involved in sperm axoneme assembly. Located in perinuclear region of cytoplasm. Is expressed in several structures, including embryonic/larval esophagus; neuron projection bundle of larval ventral nerve cord; ovary; presumptive embryonic/larval central nervous system; and spermatozoon. Human ortholog(s) of this gene implicated in keratoconus; lissencephaly; lissencephaly 3; microcephaly; and visual epilepsy. Orthologous to several human genes including TUBA3C (tubulin alpha 3c) and TUBA3D (tubulin alpha 3d). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See alphaTub84D in Genome Data Viewer
Location:
84D9-84D9; 3-48 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (7530753..7532732)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (3356475..3358454)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene alpha-Esterase-6 Neighboring gene pseudo Neighboring gene Rtnl2 Neighboring gene alpha-Esterase-5 Neighboring gene alpha-Esterase-4 Neighboring gene antisense RNA:CR46128

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables myosin binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables structural constituent of cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in microtubule-based process IEA
Inferred from Electronic Annotation
more info
 
involved_in mitotic cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in sperm axoneme assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in spermatogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in microtubule IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 
located_in perinuclear region of cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
alpha-Tubulin at 84D
Names
CG2512-PA
Tubulin-alpha3
alpha tubulin
alpha-Tubulin
alpha-tubulin84D
alphaT
alphaTub84D-PA
alphaTubulin 84D
alphatubulin
tubulin
tubulin alpha-3 chain
tubulin alpha3
tubulin at 84D

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    7530753..7532732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079540.6NP_524264.1  alpha-Tubulin at 84D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524264.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P06605, Q9VIB8
    UniProtKB/TrEMBL
    K7WKV5
    Related
    FBpp0081062
    Conserved Domains (1) summary
    PTZ00335
    Location:1439
    PTZ00335; tubulin alpha chain; Provisional