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LOC408966 dnaJ homolog subfamily B member 6 [ Apis mellifera (honey bee) ]

Gene ID: 408966, updated on 1-Oct-2024

Summary

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Gene symbol
LOC408966
Gene description
dnaJ homolog subfamily B member 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB41858
Orthologs
all
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Genomic context

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See LOC408966 in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
10
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG8 NC_037645.1 (7608846..7621581)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG8 NC_007077.3 (8476709..8488210, complement)

Linkage Group LG8 - NC_037645.1Genomic Context describing neighboring genes Neighboring gene CRISP/Allergen/PR-1 Neighboring gene calcium-binding mitochondrial carrier protein Aralar1 Neighboring gene uncharacterized LOC113218962 Neighboring gene Acyl-CoA binding protein 1 Neighboring gene uncharacterized LOC102655699 Neighboring gene ran-binding protein 3 Neighboring gene serine/threonine-protein kinase STE20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6; dnaJ homolog subfamily B member 6-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037645.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    7608846..7621581
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026442170.1 → XP_026297955.1  dnaJ homolog subfamily B member 6 isoform X3

    UniProtKB/TrEMBL
    A0A7M7MLV8, A0A8B8H1V0
    Conserved Domains (1) summary
    COG0484
    Location:2 → 149
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_006564536.3 → XP_006564599.1  dnaJ homolog subfamily B member 6-B isoform X1

    See identical proteins and their annotated locations for XP_006564599.1

    UniProtKB/TrEMBL
    A0A7M7GS42, A0A7M7GWF5, A0A8B6Z001, A0A8B6Z015
    Conserved Domains (2) summary
    PRK10767
    Location:3 → 172
    PRK10767; chaperone protein DnaJ; Provisional
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  3. XM_006564535.3 → XP_006564598.1  dnaJ homolog subfamily B member 6-B isoform X1

    See identical proteins and their annotated locations for XP_006564598.1

    UniProtKB/TrEMBL
    A0A7M7GS42, A0A7M7GWF5, A0A8B6Z001, A0A8B6Z015
    Conserved Domains (2) summary
    PRK10767
    Location:3 → 172
    PRK10767; chaperone protein DnaJ; Provisional
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  4. XM_026442171.1 → XP_026297956.1  dnaJ homolog subfamily B member 6 isoform X4

    UniProtKB/TrEMBL
    A0A7M7MM75, A0A8B8H1U7
    Conserved Domains (1) summary
    COG0484
    Location:2 → 112
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  5. XM_006564539.3 → XP_006564602.1  dnaJ homolog subfamily B member 6 isoform X2

    See identical proteins and their annotated locations for XP_006564602.1

    UniProtKB/TrEMBL
    A0A7M7GRH7, A0A7M7GWN2, A0A8B6YZZ9, A0A8B6Z3I2
    Conserved Domains (1) summary
    COG0484
    Location:2 → 112
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  6. XM_006564538.3 → XP_006564601.1  dnaJ homolog subfamily B member 6 isoform X2

    See identical proteins and their annotated locations for XP_006564601.1

    UniProtKB/TrEMBL
    A0A7M7GRH7, A0A7M7GWN2, A0A8B6YZZ9, A0A8B6Z3I2
    Conserved Domains (1) summary
    COG0484
    Location:2 → 112
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  7. XM_006564537.3 → XP_006564600.1  dnaJ homolog subfamily B member 6-B isoform X1

    See identical proteins and their annotated locations for XP_006564600.1

    UniProtKB/TrEMBL
    A0A7M7GS42, A0A7M7GWF5, A0A8B6Z001, A0A8B6Z015
    Conserved Domains (2) summary
    PRK10767
    Location:3 → 172
    PRK10767; chaperone protein DnaJ; Provisional
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain
Nucleotide Protein Strain
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