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HTR2C 5-hydroxytryptamine receptor 2C [ Bos taurus (domestic cattle) ]

Gene ID: 407134, updated on 4-Oct-2024

Summary

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Gene symbol
HTR2C
Gene description
5-hydroxytryptamine receptor 2C
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
5HT2C; 5-HT2C; 5htr2c
Orthologs
human mouse all
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Genomic context

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See HTR2C in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (63090234..63265803)

Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene microRNA mir-1298 Neighboring gene microRNA mir-1911 Neighboring gene microRNA mir-448 Neighboring gene RNA binding motif protein, X-linked 2-like Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene histone H2B type 1-A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. 5-HT(2) receptor-mediated phosphoinositide hydrolysis in bovine ciliary epithelium. Inoue-Matsuhisa E, et al. J Ocul Pharmacol Ther, 2003 Feb. PMID 12648304
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. 5-HT(2) receptors are coupled to phospholipase C in bovine ciliary epithelium.
    Title: 5-HT(2) receptor-mediated phosphoinositide hydrolysis in bovine ciliary epithelium.
Submit: New GeneRIF Correction

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in feeding behavior IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in locomotory behavior IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-hydroxytryptamine receptor 2C
Names
5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled
5-hydroxytryptamine 2C receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    63090234..63265803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059883829.1 → XP_059739812.1  5-hydroxytryptamine receptor 2C

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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