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mospd1 motile sperm domain containing 1 [ Danio rerio (zebrafish) ]

Gene ID: 406678, updated on 12-Sep-2024

Summary

Official Symbol
mospd1provided by ZNC
Official Full Name
motile sperm domain containing 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-2691
See related
Ensembl:ENSDARG00000028614 AllianceGenome:ZFIN:ZDB-GENE-040426-2691
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:56336; wu:fc26f10
Summary
Predicted to be located in Golgi membrane and endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm. Orthologous to human MOSPD1 (motile sperm domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See mospd1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (31550847..31562719, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (31210533..31222405, complement)

Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U109 Neighboring gene PABIR family member 2 Neighboring gene small nucleolar RNA U109 Neighboring gene integrator complex subunit 6 like Neighboring gene membrane magnesium transporter 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
motile sperm domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_213369.1NP_998534.1  motile sperm domain-containing protein 1

    See identical proteins and their annotated locations for NP_998534.1

    Status: PROVISIONAL

    Source sequence(s)
    BC046085
    UniProtKB/TrEMBL
    A0A8M1PGY5, Q7ZUX7
    Related
    ENSDARP00000031983.4, ENSDART00000034979.6
    Conserved Domains (1) summary
    pfam00635
    Location:17114
    Motile_Sperm; MSP (Major sperm protein) domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007125.7 Reference GRCz11 Primary Assembly

    Range
    31550847..31562719 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394915.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    106951..118856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)