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slc25a33 solute carrier family 25 member 33 [ Danio rerio (zebrafish) ]

Gene ID: 406436, updated on 12-Sep-2024

Summary

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Official Symbol
slc25a33provided by ZNC
Official Full Name
solute carrier family 25 member 33provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-2183
See related
Ensembl:ENSDARG00000039931 AllianceGenome:ZFIN:ZDB-GENE-040426-2183
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:65787; zgc:77728; wu:fe01d11
Summary
Predicted to enable pyrimidine nucleotide transmembrane transporter activity. Predicted to be involved in pyrimidine nucleotide import into mitochondrion. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in margin; myotome; and pharyngeal arch 3-7 skeleton. Orthologous to human SLC25A33 (solute carrier family 25 member 33). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
human mouse all
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Genomic context

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See slc25a33 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (29861243..29878643, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (29934702..29952102, complement)

Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene forkhead box L2-like Neighboring gene transmembrane protein 201 Neighboring gene aurora kinase A interacting protein 1 Neighboring gene matrix-remodelling associated 8b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene expression cartography. Nitzan M, et al. Nature, 2019 Dec. PMID 31748748
  2. Spatial reconstruction of single-cell gene expression data. Satija R, et al. Nat Biotechnol, 2015 May. PMID 25867923, Free PMC Article
  3. Expression and regulation of drug transporters in vertebrate neutrophils. Foulkes MJ, et al. Sci Rep, 2017 Jul 10. PMID 28694436, Free PMC Article
  4. The zebrafish gene map defines ancestral vertebrate chromosomes. Woods IG, et al. Genome Res, 2005 Sep. PMID 16109975, Free PMC Article
  5. Evolution of complexity in the zebrafish synapse proteome. Bayés À, et al. Nat Commun, 2017 Mar 2. PMID 28252024, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC4399

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables pyrimidine nucleotide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables pyrimidine nucleotide transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in mitochondrial genome maintenance IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in pyrimidine nucleotide import into mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
solute carrier family 25 member 33
Names
mitochondrial carrier protein
solute carrier family 25 (pyrimidine nucleotide carrier), member 33

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_213157.1 → NP_998322.1  solute carrier family 25 member 33

    See identical proteins and their annotated locations for NP_998322.1

    Status: PROVISIONAL

    Source sequence(s)
    BC056716
    UniProtKB/Swiss-Prot
    Q6P036
    Related
    ENSDARP00000058406.5, ENSDART00000058407.6
    Conserved Domains (2) summary
    PTZ00169
    Location:4 → 309
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:6 → 116
    Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007134.7 Reference GRCz11 Primary Assembly

    Range
    29861243..29878643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6P036.1 GenPept UniProtKB/Swiss-Prot:Q6P036

Gene LinkOut

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