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CG1161 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40638, updated on 18-Sep-2024

Summary

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Official Symbol
CG1161provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0037313
Locus tag
Dmel_CG1161
See related
AllianceGenome:FB:FBgn0037313
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG1161
Summary
Predicted to be located in lysosomal membrane. Is expressed in adult head; embryonic/larval midgut; and organism. Orthologous to human TMEM9B (TMEM9 domain family member B) and TMEM9 (transmembrane protein 9). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

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See CG1161 in Genome Data Viewer
Location:
82F10-82F11; 3-47.5 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (5355092..5356748)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1180814..1182470)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene mustard Neighboring gene Tim17b1 Neighboring gene uncharacterized protein Neighboring gene Proteasome beta7 subunit Neighboring gene Ceramide kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein-DNA interaction mapping using genomic tiling path microarrays in Drosophila. Sun LV, et al. Proc Natl Acad Sci U S A, 2003 Aug 5. PMID 12876199, Free PMC Article
  2. The bHLH Transcription Factor Hand Regulates the Expression of Genes Critical to Heart and Muscle Function in Drosophila melanogaster. Hallier B, et al. PLoS One, 2015. PMID 26252215, Free PMC Article
  3. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
  4. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
  5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG1161-PA
CG1161-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    5355092..5356748
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001014606.2 → NP_001014606.2  uncharacterized protein Dmel_CG1161, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001014606.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q59E06
    Conserved Domains (1) summary
    pfam05434
    Location:97 → 177
    Tmemb_9; TMEM9

  2. NM_141271.3 → NP_649528.2  uncharacterized protein Dmel_CG1161, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649528.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VNA4
    UniProtKB/TrEMBL
    G4LU11, Q8SXE9
    Related
    FBpp0078431
    Conserved Domains (1) summary
    pfam05434
    Location:97 → 226
    Tmemb_9; TMEM9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q59E06 Q59E06
Q8SXE9 Q8SXE9
Q9VNA4.1 Q9VNA4

Gene LinkOut

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