U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC405768 protein kinase Npk [ Danio rerio (zebrafish) ]

Gene ID: 405768, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC405768
Gene description
protein kinase Npk
See related
Ensembl:ENSDARG00000044615
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC405768 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (6924604..6964788)
105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (6767393..6807563)

Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene Ras and Rab interactor 2b Neighboring gene Rap guanine nucleotide exchange factor 4b Neighboring gene si:ch211-114n24.6 Neighboring gene tubulin, alpha 8 like 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
protein kinase Npk

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001366971.1 → NP_001353900.1  protein kinase Npk isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL929341, CU659670
    UniProtKB/TrEMBL
    A0A8M2BCZ6, I3ISI6
    Related
    ENSDARP00000125869.2, ENSDART00000151393.3
    Conserved Domains (1) summary
    cd14060
    Location:53 → 294
    STKc_MLTK; Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated protein Triple Kinase

  2. NM_212842.2 → NP_998007.2  protein kinase Npk isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL929341, CU659670
    UniProtKB/TrEMBL
    Q90ZY8
    Related
    ENSDARP00000065550.5, ENSDART00000065551.7
    Conserved Domains (1) summary
    cd14060
    Location:53 → 294
    STKc_MLTK; Catalytic domain of the Serine/Threonine Kinase, Mixed lineage kinase-Like mitogen-activated protein Triple Kinase

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007117.7 Reference GRCz11 Primary Assembly

    Range
    6924604..6964788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools