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CG9776 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40546, updated on 2-Nov-2024

Summary

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Official Symbol
CG9776provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0027866
Locus tag
Dmel_CG9776
See related
AllianceGenome:FB:FBgn0027866
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:LD19168; Dmel\CG9776
Summary
Predicted to be involved in negative regulation of DNA-templated transcription and positive regulation of DNA-templated transcription. Predicted to be active in nucleoplasm. Orthologous to human ZNF318 (zinc finger protein 318). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See CG9776 in Genome Data Viewer
Location:
82A3-82A4; 3-47.1 cM
Exon count:
8
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4327814..4334071, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (153536..159793, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Suv3 helicase Neighboring gene Synaptotagmin 14 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene S-phase kinase-associated protein 2 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transposition of the vertebrate Tol2 transposable element in Drosophila melanogaster. Urasaki A, et al. Gene, 2008 Dec 1. PMID 18775483
  2. TFOFinder: Python program for identifying purine-only double-stranded stretches in the predicted secondary structure(s) of RNA targets. Neugroschl A, et al. PLoS Comput Biol, 2023 Aug. PMID 37624852, Free PMC Article
  3. A genomic response to the yeast transcription factor GAL4 in Drosophila. Liu Y, et al. Fly (Austin), 2008 Mar-Apr. PMID 18820459, Free PMC Article
  4. spenito is required for sex determination in Drosophila melanogaster. Yan D, et al. Proc Natl Acad Sci U S A, 2015 Sep 15. PMID 26324914, Free PMC Article
  5. A comprehensive Drosophila resource to identify key functional interactions between SARS-CoV-2 factors and host proteins. Guichard A, et al. Cell Rep, 2023 Aug 29. PMID 37480566, Free PMC Article

See all (37) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

mobile_element

  • Loc: c4330663-4330388 mobile_element_type = transposon:INE-1{}3652

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in positive regulation of DNA-templated transcription IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG9776-PA
CG9776-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    4327814..4334071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_141198.4 → NP_649455.1  uncharacterized protein Dmel_CG9776, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649455.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q7JRP8, Q8I092, Q9V468
    Related
    FBpp0078595
    Conserved Domains (2) summary
    smart00451
    Location:546 → 577
    ZnF_U1; U1-like zinc finger
    cl21462
    Location:289 → 322
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

  2. NM_164339.4 → NP_730813.3  uncharacterized protein Dmel_CG9776, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_730813.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9V468
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9V468.1 Q9V468

Gene LinkOut

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