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homologue of retroviral POL genes Reverse Transcriptase [ Cladosporium fulvum T-1 virus ]

Gene ID: 40526545, updated on 1-Aug-2022

Summary

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Gene symbol
homologue of retroviral POL genes
Gene description
Reverse Transcriptase
Locus tag
FLA32_gp2
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cladosporium fulvum T-1 virus (strain: Race 4)
Lineage
Viruses; Ortervirales; Metaviridae; Metavirus
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Genomic context

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Location:
clone: pNOM712.3
Sequence:
NC_043491.1 (2327..5464)

NC_043491.1Genomic Context describing neighboring genes Neighboring gene putative gag homologue Neighboring gene env homologue

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_043491.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CfT-I: an LTR-retrotransposon in Cladosporium fulvum, a fungal pathogen of tomato. McHale MT, et al. Mol Gen Genet, 1992 Jun. PMID 1377773

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Reverse Transcriptase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_043491.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009666308.1 Reverse Transcriptase, partial [Cladosporium fulvum T-1 virus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    V9H1L3
    Conserved Domains (5) summary
    cd00303
    Location:100 → 192
    retropepsin_like; Retropepsins; pepsin-like aspartate proteases
    cd01647
    Location:348 → 525
    RT_LTR; Reverse transcriptases (RTs) from retrotransposons and retroviruses which have long terminal repeats (LTRs) in their DNA copies but not in their RNA template. RT catalyzes DNA replication from an RNA template, and is responsible for the replication of ...
    cd09274
    Location:619 → 738
    RNase_HI_RT_Ty3; Ty3/Gypsy family of RNase HI in long-term repeat retroelements
    pfam00665
    Location:872 → 986
    rve; Integrase core domain
    pfam17921
    Location:791 → 849
    Integrase_H2C2; Integrase zinc binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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