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Or4p4b-ps1 olfactory receptor family 4 subfamily P member 4B, pseudogene 1 [ Mus musculus (house mouse) ]

Gene ID: 404395, updated on 26-Oct-2024

Summary

Official Symbol
Or4p4b-ps1provided by MGI
Official Full Name
olfactory receptor family 4 subfamily P member 4B, pseudogene 1provided by MGI
Primary source
MGI:MGI:3030309
See related
Ensembl:ENSMUSG00000075126 AllianceGenome:MGI:3030309
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Olfr475-ps1
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. An allelic polymorphism in this gene results in both coding and non-coding variants; the reference genome represents the non-coding allele. [provided by RefSeq, Apr 2024]
Annotation information
Note: Genetic polymorphisms result in both protein coding and non-coding alleles of this gene.
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Genomic context

See Or4p4b-ps1 in Genome Data Viewer
Location:
2 D; 2 49.99 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (88453649..88454580)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (88623305..88624236)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 4 subfamily C member 102 Neighboring gene olfactory receptor 751, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_05067 Neighboring gene olfactory receptor family 4 subfamily S member 2 Neighboring gene olfactory receptor family 4 subfamily P member 4

Genomic regions, transcripts, and products

General protein information

Preferred Names
olfactory receptor family 4 subfamily P member 4B, pseudogene 1
Names
GA_x6K02T2PRF0-25008-25939
MOR225-17_p
olfactory receptor 475, pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001429703.1NP_001416632.1  olfactory receptor family 4 subfamily P member 4B, pseudogene 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (coding) represents the functional allele that is not present in some strains, including the strain of the reference genome.
    Source sequence(s)
    OW971784

RNA

  1. NR_190767.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (non-coding) includes an indel resulting in a frameshift and a premature stop codon. It represents the non-functional allele present in some strains, including the strain of the reference genome.
    Source sequence(s)
    AL929265

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    88453649..88454580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_003310.2: Suppressed sequence

    Description
    NG_003310.2: This RefSeq was removed by NCBI staff.