U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SEC61B SEC61 translocon subunit beta [ Canis lupus familiaris (dog) ]

Gene ID: 404018, updated on 17-Aug-2024

Summary

Official Symbol
SEC61Bprovided by VGNC
Official Full Name
SEC61 translocon subunit betaprovided by VGNC
Primary source
VGNC:VGNC:49616
See related
Ensembl:ENSCAFG00845007765
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See SEC61B in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 11 NC_051815.1 (57387547..57394054)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 11 NC_006593.4 (54710432..54716934)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 11 NC_049232.1 (56616366..56622875)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 11 NC_049271.1 (55892012..55898512)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 11 NC_049752.1 (55916992..55923491)

Chromosome 11 - NC_051815.1Genomic Context describing neighboring genes Neighboring gene proteasome subunit alpha type-1-like Neighboring gene ALG2 alpha-1,3/1,6-mannosyltransferase Neighboring gene uncharacterized LOC111098106 Neighboring gene uncharacterized LOC102153673

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
protein transport protein Sec61 subunit beta
Names
SEC61 translocon beta subunit
Sec61 beta subunit
protein translocation complex beta subunit

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003326.1NP_001003326.1  protein transport protein Sec61 subunit beta

    See identical proteins and their annotated locations for NP_001003326.1

    Status: PROVISIONAL

    Source sequence(s)
    L25052
    UniProtKB/Swiss-Prot
    P60467
    UniProtKB/TrEMBL
    A0A8C0R3V6
    Related
    ENSCAFP00845010616.1, ENSCAFT00845013672.1
    Conserved Domains (1) summary
    pfam03911
    Location:5491
    Sec61_beta; Sec61beta family

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051815.1 Reference ROS_Cfam_1.0

    Range
    57387547..57394054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049271.1 Alternate UMICH_Zoey_3.1

    Range
    55892012..55898512
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049752.1 Alternate UNSW_CanFamBas_1.0

    Range
    55916992..55923491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049232.1 Alternate UU_Cfam_GSD_1.0

    Range
    56616366..56622875
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006593.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    54710432..54716934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)