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KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 [ Canis lupus familiaris (dog) ]

Gene ID: 403983, updated on 17-Aug-2024

Summary

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Official Symbol
KCNMB1provided by VGNC
Official Full Name
potassium calcium-activated channel subfamily M regulatory beta subunit 1provided by VGNC
Primary source
VGNC:VGNC:42282
See related
Ensembl:ENSCAFG00845002523
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See KCNMB1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (41912957..41922108)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (41491752..41497517)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (42430404..42436172)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (41733152..41738919)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (41919686..41925451)

Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid type A receptor subunit pi Neighboring gene potassium voltage-gated channel interacting protein 1 Neighboring gene uncharacterized LOC102152044 Neighboring gene uncharacterized LOC102151981 Neighboring gene uncharacterized LOC111095547 Neighboring gene lymphocyte cytosolic protein 2 Neighboring gene chromosome 4 C5orf58 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning and expression of the large-conductance Ca(2+)-activated K+ channel from colonic smooth muscle. Vogalis F, et al. Am J Physiol, 1996 Oct. PMID 8897882
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-activated potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables potassium channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated potassium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-activated potassium channel subunit beta-1
Names
BK channel subunit beta-1
BKbeta
BKbeta1
calcium activated potassium channel beta subunit protein
calcium-activated potassium channel subunit beta
calcium-activated potassium channel, subfamily M subunit beta-1
charybdotoxin receptor subunit beta-1
k(VCA)beta-1
maxi K channel subunit beta-1
potassium large conductance calcium-activated channel, subfamily M, beta member 1
slo-beta
slo-beta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003299.1 → NP_001003299.1  calcium-activated potassium channel subunit beta-1

    See identical proteins and their annotated locations for NP_001003299.1

    Status: PROVISIONAL

    Source sequence(s)
    U41002
    UniProtKB/Swiss-Prot
    Q28266
    Conserved Domains (1) summary
    pfam03185
    Location:7 → 190
    CaKB; Calcium-activated potassium channel, beta subunit

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051808.1 Reference ROS_Cfam_1.0

    Range
    41912957..41922108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038662233.1 → XP_038518161.1  calcium-activated potassium channel subunit beta-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JWT5, A0A8C0LSG2, A0A8I3RQS1
    Related
    ENSCAFP00845003571.1, ENSCAFT00845004467.1
    Conserved Domains (1) summary
    pfam03185
    Location:7 → 190
    CaKB; Calcium-activated potassium channel, beta subunit

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049264.1 Alternate UMICH_Zoey_3.1

    Range
    41733152..41738919
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

    Range
    41919686..41925451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

    Range
    42430404..42436172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    41491752..41497517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q28266.3 GenPept UniProtKB/Swiss-Prot:Q28266

Gene LinkOut

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Molecular Biology Databases
Research Materials