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GLB1 galactosidase beta 1 [ Canis lupus familiaris (dog) ]

Gene ID: 403873, updated on 17-Aug-2024

Summary

Official Symbol
GLB1provided by VGNC
Official Full Name
galactosidase beta 1provided by VGNC
Primary source
VGNC:VGNC:41249
See related
Ensembl:ENSCAFG00845023378
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See GLB1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 23 NC_051827.1 (3992209..4074051)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 23 NC_006605.4 (3776393..3858177)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 23 NC_049244.1 (3927851..4009519)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 23 NC_049283.1 (3826915..3908721)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 23 NC_049764.1 (3954230..4036008)

Chromosome 23 - NC_051827.1Genomic Context describing neighboring genes Neighboring gene sushi domain containing 5 Neighboring gene cartilage associated protein Neighboring gene transmembrane protein with metallophosphoesterase domain Neighboring gene uncharacterized LOC119865339 Neighboring gene uncharacterized LOC111091917 Neighboring gene E3 ubiquitin-protein ligase RNF138-like

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactosidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in vacuole IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
beta-galactosidase
Names
acid beta-galactosidase
lactase
lysosomal beta-galactosidase
NP_001032730.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037641.1NP_001032730.1  beta-galactosidase precursor

    See identical proteins and their annotated locations for NP_001032730.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ196436
    UniProtKB/Swiss-Prot
    O62800, Q3HTI1, Q9TRY9
    UniProtKB/TrEMBL
    A0A8C0SB70, A0A8I3PJJ8
    Related
    ENSCAFP00845032404.1, ENSCAFT00845041332.1
    Conserved Domains (2) summary
    pfam01301
    Location:41356
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:527620
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051827.1 Reference ROS_Cfam_1.0

    Range
    3992209..4074051
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049283.1 Alternate UMICH_Zoey_3.1

    Range
    3826915..3908721
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049764.1 Alternate UNSW_CanFamBas_1.0

    Range
    3954230..4036008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049244.1 Alternate UU_Cfam_GSD_1.0

    Range
    3927851..4009519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006605.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    3776393..3858177
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)