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C5L36_0E02880 hypothetical protein [ Pichia kudriavzevii ]

Gene ID: 40386085, updated on 17-May-2024

Summary

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Gene symbol
C5L36_0E02880
Gene description
hypothetical protein
Locus tag
C5L36_0E02880
See related
FungiDB:C5L36_0E02880; VEuPathDB:C5L36_0E02880
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Pichia kudriavzevii (strain: CBS573, type-material: type material of Candida krusei)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Pichia
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Genomic context

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See C5L36_0E02880 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_042510.1 (596950..601221, complement)

Chromosome 5 - NC_042510.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042510.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose:glycoprotein glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_029323702.1
  • PKUD0E02880; similar to Saccharomyces cerevisiae YOR336W (KRE5); ancestral locus Anc_7.57

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_042510.1 Reference assembly

    Range
    596950..601221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029467842.1 → XP_029323702.1  uncharacterized protein C5L36_0E02880 [Pichia kudriavzevii]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1V2LU67, A0A2U9RB17
    Conserved Domains (5) summary
    pfam06427
    Location:1013 → 1100
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
    pfam18400
    Location:43 → 230
    Thioredoxin_12; Thioredoxin-like domain
    pfam18401
    Location:302 → 414
    Thioredoxin_13; Thioredoxin-like domain
    pfam18402
    Location:440 → 606
    Thioredoxin_14; Thioredoxin-like domain
    pfam18404
    Location:1138 → 1402
    Glyco_transf_24; Glucosyltransferase 24
Nucleotide Protein
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