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C5L36_0B11120 hypothetical protein [ Pichia kudriavzevii ]

Gene ID: 40383642, updated on 17-May-2024

Summary

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Gene symbol
C5L36_0B11120
Gene description
hypothetical protein
Locus tag
C5L36_0B11120
See related
FungiDB:C5L36_0B11120; VEuPathDB:C5L36_0B11120
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Pichia kudriavzevii (strain: CBS573, type-material: type material of Candida krusei)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Pichia
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Genomic context

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See C5L36_0B11120 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_042507.1 (2373836..2375464)

Chromosome 2 - NC_042507.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene tRNA-Arg Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042507.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall mannoprotein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_029321354.1
  • PKUD0B11120; Pfam Domains: Glyco_transf_15(1.5e-156)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_042507.1 Reference assembly

    Range
    2373836..2375464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029465495.1 → XP_029321354.1  uncharacterized protein C5L36_0B11120 [Pichia kudriavzevii]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1Z8JIJ5, A0A2U9R3G9
    Conserved Domains (1) summary
    COG5020
    Location:167 → 486
    KTR1; Mannosyltransferase [Carbohydrate transport and metabolism]
Nucleotide Protein
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