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HMGN2 high mobility group nucleosomal binding domain 2 [ Canis lupus familiaris (dog) ]

Gene ID: 403686, updated on 5-Mar-2024

Summary

Gene symbol
HMGN2
Gene description
high mobility group nucleosomal binding domain 2
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
HMG-17
Orthologs
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Genomic context

See HMGN2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (74142182..74145929, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (70155762..70159506, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (72976197..72979941, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (70967003..70970745, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (71972747..71976493, complement)

Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase A1 Neighboring gene uncharacterized LOC102157349 Neighboring gene U6 spliceosomal RNA Neighboring gene dehydrodolichyl diphosphate synthase subunit Neighboring gene lin-28 homolog A Neighboring gene zinc finger protein 683

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosomal DNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
non-histone chromosomal protein HMG-17
Names
high mobility group nucleosome-binding domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003101.3NP_001003101.1  non-histone chromosomal protein HMG-17

    See identical proteins and their annotated locations for NP_001003101.1

    Status: VALIDATED

    Source sequence(s)
    JAAUVH010000373
    UniProtKB/Swiss-Prot
    Q711A6
    UniProtKB/TrEMBL
    A0A8P0T3U6
    Conserved Domains (1) summary
    pfam01101
    Location:188
    HMG14_17; HMG14 and HMG17

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051806.1 Reference ROS_Cfam_1.0

    Range
    74142182..74145929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049262.1 Alternate UMICH_Zoey_3.1

    Range
    70967003..70970745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

    Range
    71972747..71976493 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

    Range
    72976197..72979941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    70155762..70159506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)