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RWDD4 RWD domain containing 4 [ Canis lupus familiaris (dog) ]

Gene ID: 403525, updated on 17-Aug-2024

Summary

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Official Symbol
RWDD4provided by VGNC
Official Full Name
RWD domain containing 4provided by VGNC
Primary source
VGNC:VGNC:45816
See related
Ensembl:ENSCAFG00845016321
Gene type
protein coding
RefSeq status
INFERRED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See RWDD4 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 16 NC_051820.1 (48953440..48969813)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 16 NC_006598.4 (47164716..47179643)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 16 NC_049237.1 (47666388..47681316)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 16 NC_049276.1 (46916999..46931713)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 16 NC_049757.1 (47532544..47547275)

Chromosome 16 - NC_051820.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene trafficking protein particle complex subunit 11 Neighboring gene uncharacterized LOC111090347 Neighboring gene inhibitor of growth family member 2 Neighboring gene CDKN2A interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A method for the large-scale cloning of nuclear proteins and nuclear targeting sequences on a functional basis. Pichon B, et al. Anal Biochem, 2000 Sep 10. PMID 10964405
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RWD domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001286853.1 → NP_001273782.1  RWD domain-containing protein 4

    Status: INFERRED

    Source sequence(s)
    JAAUVH010000104
    UniProtKB/TrEMBL
    A0A8C0N466, A0A8C0N4P3, A0A8I3P262
    Related
    ENSCAFP00845022810.1, ENSCAFT00845028997.1
    Conserved Domains (1) summary
    pfam05773
    Location:5 → 107
    RWD; RWD domain

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051820.1 Reference ROS_Cfam_1.0

    Range
    48953440..48969813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038688822.1 → XP_038544750.1  RWD domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NT20
    Conserved Domains (1) summary
    cl02687
    Location:6 → 44
    RWD; RWD domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049276.1 Alternate UMICH_Zoey_3.1

    Range
    46916999..46931713
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049757.1 Alternate UNSW_CanFamBas_1.0

    Range
    47532544..47547275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049237.1 Alternate UU_Cfam_GSD_1.0

    Range
    47666388..47681316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006598.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    47164716..47179643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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