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iars1.S isoleucyl-tRNA synthetase 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 403361, updated on 4-Nov-2024

Summary

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Official Symbol
iars1.S
Official Full Name
isoleucyl-tRNA synthetase 1 S homeolog
Primary source
Xenbase:XB-GENE-1001590
Locus tag
XELAEV_18025750mg
See related
EnsemblRapid:ENSXLAG00005016996 AllianceGenome:Xenbase:XB-GENE-1001590
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
iars; IleRS; iars.S
Summary
Predicted to enable ATP binding activity; catalytic activity, acting on a tRNA; and tRNA binding activity. Predicted to act upstream of or within isoleucyl-tRNA aminoacylation. Is expressed in respiratory system. Orthologous to human IARS1 (isoleucyl-tRNA synthetase 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See iars1.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
35
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (103573670..103636568)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (97237369..97300017)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene osteomodulin S homeolog Neighboring gene osteoglycin S homeolog Neighboring gene small nucleolar RNA SNORA84 Neighboring gene ATPase plasma membrane Ca2+ transporting 2 S homeolog Neighboring gene bassoon presynaptic cytomatrix protein S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC68929

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
  
enables aminoacyl-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
  
enables isoleucine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
  
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within isoleucyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
isoleucyl-tRNA synthetase 1 S homeolog
Names
isoleucyl-tRNA synthetase S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001090928.1 → NP_001084397.1  isoleucyl-tRNA synthetase 1 S homeolog

    See identical proteins and their annotated locations for NP_001084397.1

    Status: PROVISIONAL

    Source sequence(s)
    BC064686
    UniProtKB/TrEMBL
    Q6P284
    Related
    ENSXLAP00005050124.1, ENSXLAT00005051265.1
    Conserved Domains (1) summary
    PLN02882
    Location:10 → 1071
    PLN02882; aminoacyl-tRNA ligase

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    103573670..103636568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041591272.1 → XP_041447206.1  isoleucyl-tRNA synthetase 1 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8GH96, A0A974D069
    Related
    ENSXLAP00005050076.1, ENSXLAT00005051217.1
    Conserved Domains (1) summary
    PLN02882
    Location:10 → 1071
    PLN02882; aminoacyl-tRNA ligase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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