pvalb1 parvalbumin 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: pvalb1provided by ZNC
Official Full Name: parvalbumin 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-040625-57
See related: Ensembl:ENSDARG00000037789 AllianceGenome:ZFIN:ZDB-GENE-040625-57
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:86939
Summary: Predicted to enable calcium ion binding activity. Predicted to be active in cytoplasm. Is expressed in musculature system and myotome. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 3

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	3	NC_007114.7 (61193890..61205706, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	3	NC_007114.6 (60961302..60973150, complement)

Chromosome 3 - NC_007114.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables calcium ion binding	IBA Inferred from Biological aspect of Ancestor more info
enables calcium ion binding	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: parvalbumin 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_205572.2 → NP_991135.1 parvalbumin 1

See identical proteins and their annotated locations for NP_991135.1

Status: VALIDATED

Source sequence(s)

CR352263

UniProtKB/TrEMBL

A0A0R4INM7, A0A8N7XJB0, Q6IQ58, Q804W0

Related

ENSDARP00000055061.3, ENSDART00000055062.5

Conserved Domains (2) summary

cd00051
Location:43 → 108

EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

pfam13499
Location:44 → 107

EF-hand_7; EF-hand domain pair