bicc2 bicaudal C homolog 2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: bicc2provided by ZNC
Official Full Name: bicaudal C homolog 2provided by ZNC
Primary source: ZFIN:ZDB-GENE-110110-3
See related: Ensembl:ENSDARG00000076557 AllianceGenome:ZFIN:ZDB-GENE-110110-3
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to enable RNA binding activity. Predicted to be active in cytoplasm. Used to study autosomal dominant polycystic kidney disease. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 14

Exon count:: 20

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	14	NC_007125.7 (2941796..2985353, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	14	NC_007125.6 (2690679..2728761, complement)

Chromosome 14 - NC_007125.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: bicaudal C homolog 2

Names: bicaudal-C; bicc1a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_203420.1 → NP_981965.1 bicaudal C homolog 2

See identical proteins and their annotated locations for NP_981965.1

Status: PROVISIONAL

Source sequence(s)

AY513238

UniProtKB/TrEMBL

Q6R5A4

Related

ENSDARP00000029283.5, ENSDART00000031211.7

Conserved Domains (3) summary

cd09520
Location:745 → 809

SAM_BICC1; SAM domain of BICC1 (bicaudal) subfamily

smart00454
Location:743 → 806

SAM; Sterile alpha motif

cd02394
Location:138 → 205

vigilin_like_KH; K homology RNA-binding domain_vigilin_like. The vigilin family is a large and extended family of multiple KH-domain proteins, including vigilin, also called high density lipoprotein binding protien (HBP), fungal Scp160 and bicaudal-C. Yeast Scp160p has ...