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FGG50_gp53 tail length tape measure protein [ Xylella phage Sano ]

Gene ID: 40235893, updated on 8-Jan-2023

Summary

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Gene symbol
FGG50_gp53
Gene description
tail length tape measure protein
Locus tag
FGG50_gp53
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xylella phage Sano (nat-host: Xylella fastidiosa)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Casjensviridae; Sanovirus; Xylella virus Sano
Old locus tag
Sano_53
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Genomic context

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Sequence:
NC_042344.1 (30093..34438, complement)

NC_042344.1Genomic Context describing neighboring genes Neighboring gene tail assembly protein Neighboring gene tail assembly protein Neighboring gene structural protein Neighboring gene structural protein Neighboring gene tail length tape measure protein Neighboring gene tail length tape measure protein Neighboring gene major tail protein with Ig-like domain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042344.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of novel virulent broad-host-range phages of Xylella fastidiosa and Xanthomonas. Ahern SJ, et al. J Bacteriol, 2014 Jan. PMID 24214944, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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regulatory

  • Loc: c34438-34436 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
tail length tape measure protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_042344.1 Reference assembly

    Range
    30093..34438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009639109.1 tail length tape measure protein [Xylella phage Sano]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    V5Q7K5
    Conserved Domains (3) summary
    COG3941
    Location:448 → 756
    HI1514; Phage tail tape-measure protein, controls tail length [Mobilome: prophages, transposons]
    TIGR02168
    Location:945 → 1229
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam07888
    Location:21 → 166
    CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
Nucleotide Protein
Heading Accession and Version

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