U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RPS3AP21 RPS3A pseudogene 21 [ Homo sapiens (human) ]

Gene ID: 402287, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
RPS3AP21provided by HGNC
Official Full Name
RPS3A pseudogene 21provided by HGNC
Primary source
HGNC:HGNC:36841
See related
Ensembl:ENSG00000214784 AllianceGenome:HGNC:36841
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS3A_7_600
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RPS3AP21 in Genome Data Viewer
Location:
5q22.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (111192185..111193067, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (111702818..111703700, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (110527883..110528765, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22888 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:110465656-110466261 Neighboring gene WD repeat domain 36 Neighboring gene proline rich nuclear receptor coactivator 2 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22889 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22890 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16229 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22891 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16230 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16231 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16232 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22892 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22894 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22893 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22895 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22896 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22897 Neighboring gene calcium/calmodulin dependent protein kinase IV Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:110644539-110645132 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:110783389-110783979 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:110838395-110838556 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22898 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22899 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16233 Neighboring gene STARD4 antisense RNA 1 Neighboring gene StAR related lipid transfer domain containing 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Other Names

  • ribosomal protein S3a pseudogene 21

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_006521.2 

    Range
    101..983
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    111192185..111193067 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    111702818..111703700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials