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LOC402279 glutamate metabotropic receptor 8 pseudogene [ Homo sapiens (human) ]

Gene ID: 402279, updated on 17-Sep-2024

Summary

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Gene symbol
LOC402279
Gene description
glutamate metabotropic receptor 8 pseudogene
See related
Ensembl:ENSG00000230386
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC402279 in Genome Data Viewer
Location:
7q11.21
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (65617077..65619154)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (66839170..66841247)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (65081990..65084067)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901660 Neighboring gene integrator complex subunit 4 pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:64974100-64975098 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:64997202-64997702 Neighboring gene uncharacterized LOC124901800 Neighboring gene NANOG hESC enhancer GRCh37_chr7:65103805-65104363 Neighboring gene long intergenic non-protein coding RNA 3006 Neighboring gene integrator complex subunit 4 pseudogene 2 Neighboring gene Sharpr-MPRA regulatory region 6763 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26072 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26073 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18199 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26074 Neighboring gene chaperonin containing TCP1 subunit 6 pseudogene 1 Neighboring gene small nucleolar RNA, H/ACA box 22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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Markers

Other Names

  • glutamate receptor, metabotropic 8 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007154.2 

    Range
    101..2178
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    65617077..65619154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    66839170..66841247
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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