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LINC02595 long intergenic non-protein coding RNA 2595 [ Homo sapiens (human) ]

Gene ID: 401585, updated on 10-Oct-2023

Summary

Official Symbol
LINC02595provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2595provided by HGNC
Primary source
HGNC:HGNC:53946
See related
AllianceGenome:HGNC:53946
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
Xp11.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (45848074..45851490, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (45257571..45260978, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (45707509..45710920, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene miR222/221 cluster host gene Neighboring gene microRNA 221 Neighboring gene microRNA 222 Neighboring gene NANOG hESC enhancer GRCh37_chrX:45645628-45646174 Neighboring gene NANOG hESC enhancer GRCh37_chrX:45661291-45661869 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:45662536-45663735 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20789 Neighboring gene small nucleolar RNA SNORD77 Neighboring gene NANOG hESC enhancer GRCh37_chrX:45768669-45769204 Neighboring gene SRSF6 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125365.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC234772

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    45848074..45851490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    45257571..45260978 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)