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CJI96_0000347 carnitine:acyl carnitine antiporter [ [Candida] auris ]

Gene ID: 40027696, updated on 17-May-2024

Summary

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Gene symbol
CJI96_0000347
Gene description
carnitine:acyl carnitine antiporter
Locus tag
CJI96_0000347
See related
FungiDB:CJI96_0000347; VEuPathDB:CJI96_0000347
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
[Candida] auris (strain: B11220, nat-host: Homo sapiens, type-material: culture from type material of Candida auris)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Metschnikowiaceae; Metschnikowiaceae incertae sedis; Candida/Metschnikowiaceae
Old locus tag
CJI97_002550
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Genomic context

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See CJI96_0000347 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_072812.1 (734285..735133)

Chromosome 1 - NC_072812.1Genomic Context describing neighboring genes Neighboring gene 5-aminolevulinate_synthase,_mitochondrial Neighboring gene hypothetical_protein Neighboring gene serine/threonine-protein_phosphatase_PP2A-2_catalytic_subunit Neighboring gene hypothetical_protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072812.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species. Muñoz JF, et al. Nat Commun, 2018 Dec 17. PMID 30559369, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine:acyl carnitine antiporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_072812.1 Reference assembly

    Range
    734285..735133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029034571.2 → XP_028889813.1  carnitine:acyl carnitine antiporter [[Candida] auris]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2H1A024, A0A5Q7YAH4
    Conserved Domains (1) summary
    pfam00153
    Location:11 → 95
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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