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ar.L androgen receptor L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 399456, updated on 4-Nov-2024

Summary

Official Symbol
ar.L
Official Full Name
androgen receptor L homeolog
Primary source
Xenbase:XB-GENE-479433
Locus tag
XELAEV_18002878mg
See related
EnsemblRapid:ENSXLAG00005031532 AllianceGenome:Xenbase:XB-GENE-479433
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ar; ADR; Xl alpha AR
Summary
Predicted to enable several functions, including estrogen response element binding activity; nuclear receptor activity; and zinc ion binding activity. Predicted to act upstream of or within androgen receptor signaling pathway; male gonad development; and positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in musculoskeletal system; nervous system; respiratory system; and sensory system. Human ortholog(s) of this gene implicated in several diseases, including alcohol dependence; attention deficit hyperactivity disorder; disorder of sexual development (multiple); reproductive organ cancer (multiple); and spinal muscular atrophy (multiple). Orthologous to human AR (androgen receptor). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See ar.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (30541025..30689464, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694828.1 (812014..958903)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene probable G-protein coupled receptor 83 Neighboring gene oligophrenin 1 L homeolog Neighboring gene Yip1 domain family member 6 L homeolog Neighboring gene uncharacterized LOC121396969 Neighboring gene ectodysplasin A2 receptor L homeolog

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables estrogen response element binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
androgen receptor; androgen receptor L homeolog
Names
androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease) L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    30541025..30689464 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041572639.1XP_041428573.1  androgen receptor

    UniProtKB/TrEMBL
    A0A8J1LG91, B7ZS00, P70048
    Related
    ENSXLAP00005094469.1, ENSXLAT00005096171.1
    Conserved Domains (3) summary
    cd07073
    Location:542787
    NR_LBD_AR; Ligand binding domain of the nuclear receptor androgen receptor, ligand activated transcription regulator
    cd07173
    Location:423504
    NR_DBD_AR; DNA-binding domain of androgen receptor (AR) is composed of two C4-type zinc fingers
    pfam02166
    Location:6345
    Androgen_recep; Androgen receptor

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001090884.1: Suppressed sequence

    Description
    NM_001090884.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.